Gene GM21_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1796 
Symbol 
ID8137127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2087178 
End bp2087825 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content64% 
IMG OID644869408 
Productprotein of unknown function DUF477 
Protein accessionYP_003021608 
Protein GI253700419 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0823313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTAT CGCAAGCGCA ACAGGCGGAG GAGTTCTTCT CCCCCGAGGA GAAGGAGCGG 
ATCCGCGAGG CGGTAGCGCA AGCGGAAAAA CGCTCCAGCG GCGAGATCGC CACCATGGTC 
GTTTGGGCCA GCGACCGCTA CCGGGAGGCC GAGGCGCTCG GCGCCCTGCT TTTGGCGGGG 
CTCGTCGCGG TGGCGGCGGC GGTAGCCATA AGGCATGTGA CCATCTGGAG CTACATTCCC 
TTGGTCTGCC TGCTCTTTTA TCCGGCACTT TTGCTCTTCC GTCGTTTCCC GAGGCTGAAA 
CTCTCCTTCG CAGCCGCCGG GCGCGTGGCC GACGCGGTCA GCGAAAGGGC GCTGGTCGCT 
TTCTACCAGC AGGGGCTGTA CCGGACCAAA GACGAGACCG GCATCCTCAT CTTCATCTCC 
CTTTTGGAGC ACAAGGTCTG GATCCTGGGC GACCGCGGCA TCAACCAAAA GATCCCCCAA 
GGGCAGTGGA ACAACCTCGT GGACGAACTG GCCCAGGGGC TGCGCCAGGG GAGGGCCGCT 
GACAGCCTCT GCCAAGTGAT CGCCGGCTGC GGCGACGAAC TGGCACGGCA TTTCCCCCGG 
CGTAGCGACG ACCGAAACGA ACTCCCCGAC GAGATCATCG CCTCGTGA
 
Protein sequence
MDLSQAQQAE EFFSPEEKER IREAVAQAEK RSSGEIATMV VWASDRYREA EALGALLLAG 
LVAVAAAVAI RHVTIWSYIP LVCLLFYPAL LLFRRFPRLK LSFAAAGRVA DAVSERALVA 
FYQQGLYRTK DETGILIFIS LLEHKVWILG DRGINQKIPQ GQWNNLVDEL AQGLRQGRAA 
DSLCQVIAGC GDELARHFPR RSDDRNELPD EIIAS