Gene GM21_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1790 
Symbol 
ID8137121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2081785 
End bp2083236 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID644869402 
Productbeta-lactamase 
Protein accessionYP_003021602 
Protein GI253700413 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.0797219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCA TCGTCCTGAT ACTCATGCTG TTCCCGTTGC TGGTTCCCCA GGATCTCCTC 
GCCTCAGTGG AGCCCATGCC ACCGGGGCTC GTCTCCAACA TGGATCTGTT GCTGGAAAGG
GCCATGTCCG AGAACCTCAT CGCCGGCGGA GTCGTGGTGG TCGGCAATAG TGAAGGGATA
CTGGCGACGG CCTCCCGCGG CCGGCTCAAT TCCGATCCCG GGTCAGAGCC GATCACGGAC
CGCACCTTGT TCGACGTGGC CTCCCTCACC AAGGTGGTGG CCACTACCCC TGCCGTCATC
AAGCTTCTCG ACGAGGGGAA GATCGGCCTG ACCGACCCAG TTTCCCGCTG GTTTCCCGAA
TTCGCCGGTT CGCAGCTCAC CGTGCTGCAC CTGTTGACCC ACACCTCCGG CCTTGCCGAC
GTCCGGGTGA GCTCCATCCA GGGGGTGATC AGCAAGGCCG CGGCGCAGAT GGAGCGCAGG
AGCCCCGGTA CCTCGTTCGA CTACGCCGAC ATCAACTTCA TACTGCTGGG CGAACTGGTG
CACAGGGTTT CCGGCGAGAC GCTGGACCTT TTTTGCAGGG AGCGGATCTA CGAGCCCCTG
GGGGCCAAGG TGACCCAGTT CCTCCCGCCG GCGGGGCTCG TTCCAGAGAT CGCCCCCACC
TCGGGCAACC GCGGCGGAGT GGTGCAGGAT GAGAACGCCA GACGCCTCGG GGGGGTCGCC
GGGCACGCCG GCGTGTTCAG CTCCGCCCAC GATCTCTCCC GCTACGCGCG GCTGTTGCTC
GGCAAGGGGA CACTGGACGG AAAGCGCATC CTGTCCGAGC AGATGGTCGC CCAGATGACC
ACTCCCTACC TCTGCGACAA CGGGCGCGTC AAGCGCGGCC TGGGGTGGGA CATCTCCTCT
CCCTATTCGG CGCCCAAAGG TAGCTATTTC TCGGACTCCT CCTTCGGCCA CACCGGGTAC
AGCGGCTCCT CCATCTGGAT CGACCCCGAG CAGGACCTCT TCGTGATCAT GCTCACCAGA
AGGTCGAATT ACCGCAACGT GAAGAACTTC AACCAGTTGC GCAGAGACGT CTCGACTTAC
GCCGCCGCCG ATTTCAGGTC GCCAGGAAGC GGCGAGGCGC AGCCCGTGCC TGTGGCTGAG
CTGCCGCAGA TCAAGAGCCG GGTGCTGGTC GCTTCCACCG CTGAAAAGAT CGAGATCCCC
GTGCCGCGCA GCAAGGCCAG CGCCCGCTCC AAGTGGGGCA TCGACCGGCG AGCCGCCAAG
TGCGAAACGA AGAAGAAGGA GCGGCACCTG GCCAAGGCTC GCCCCGGCAG CCGCACCGCG
AAACTGGCCA AGGCTCGCCC CGGCAGCCGC ACCGCGAAAC TGGCCAAGGC ACGCTCCGGT
CACAAAAACA GCCGCATTCC GAAAGTGGCC ACGAGCGAGG AGAAAAAGAA GCGCCGTCTG
ACCAAGAGTT AG
 
Protein sequence
MRVIVLILML FPLLVPQDLL ASVEPMPPGL VSNMDLLLER AMSENLIAGG VVVVGNSEGI 
LATASRGRLN SDPGSEPITD RTLFDVASLT KVVATTPAVI KLLDEGKIGL TDPVSRWFPE
FAGSQLTVLH LLTHTSGLAD VRVSSIQGVI SKAAAQMERR SPGTSFDYAD INFILLGELV
HRVSGETLDL FCRERIYEPL GAKVTQFLPP AGLVPEIAPT SGNRGGVVQD ENARRLGGVA
GHAGVFSSAH DLSRYARLLL GKGTLDGKRI LSEQMVAQMT TPYLCDNGRV KRGLGWDISS
PYSAPKGSYF SDSSFGHTGY SGSSIWIDPE QDLFVIMLTR RSNYRNVKNF NQLRRDVSTY
AAADFRSPGS GEAQPVPVAE LPQIKSRVLV ASTAEKIEIP VPRSKASARS KWGIDRRAAK
CETKKKERHL AKARPGSRTA KLAKARPGSR TAKLAKARSG HKNSRIPKVA TSEEKKKRRL
TKS