Gene GM21_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1787 
Symbol 
ID8137118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2077947 
End bp2079656 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content68% 
IMG OID644869399 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_003021599 
Protein GI253700410 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.0490686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAA TCACCCATAA AATCTGGCGG CCGCGCGAGG CCGATCCCGC CGCCGTGGAC 
GCGCTCACCC GCTCGGGTTT CCCCGCACTT TTGGCGCGGC TTCTGGCCAA CCGCGGCATC
GACGGGGAAA AGGGAGCGAA AGCCTACCTG TCGCCGGTAC TTTCCGGTCT GGAAAACCCC
ATGCTGATGA AGGGTATGGC AGAGGCGGTG GAGAGGCTCG CGCTCGCGCG CACACGCCAC
GAACGTGTCT GCGTGCATGG GGATTACGAC GTGGACGGGG TCACAGCCTC GGCCCTTTTG
ATCGGCTTTT TCCGCGCCGT CGGCATCGAC TGCTTTCCCT ACATACCAAA GCGCCTCACC
GAGGGGTACG GCCTTTCCCC GCAGGGGGTC GCCGCCGCTG CCAAGGGGGG GGCGACGGTG
CTGGTCACGG TGGACTGCGG CATCACCTCG CTCGACGAGG GCCTCCTTTG CCGCGAGGCC
GGCATCGATC TCATCGTCAC CGACCACCAC GCCCCCGGCG AGCGTCTCCC CGAGGCCCTC
GCCGTGATCG ACCCGCTGCA GCCCGGCTGC CCCTTCCCGT TCAAGTCGCT CGCCGGCGTC
GGGGTCGCCT TCCACCTTCT GATCGCGCTC CGCGCGAGAC TGCGCGCAGA CAACAGTTTC
ACTGCCTGCG AACCCGACCT GAAGGAGTAT CTCGACCTGG TGGCACTTGG CACCGTGGCG
GACGTGGTGC CGCTGTTGGG TCCGAACCGC ATCCTGGTGA GCTACGGGCT GAAGCAGCTG
TCGGCCGGGT CCCGGGTCGG TATCGCGGCG CTCAAGGAAG TGGCAGGCGT TACCGGGGAG
GTCGGCTGCG GCGCCGTCGG TTTCCGGCTC GCGCCGCGCA TAAACGCGGC CGGGCGCCTG
GAGGACGCGG CGCTCGGGCT GGAGCTCCTT TTGACCGGCG ACCCCGCCCG GGCAAGGGAG
ATCGCGGCTC TTCTCGACGA CAGCAACGGC GAGCGTCAGG CGCTGGAGCG AGCCACACTC
GACGAGGCGC GCGCCATGCT GGAGCAGGGG GCCTGCCGGG GGAGAAAGAG CATCGTCCTC
GGCTCCGATC TCTGGCACCC GGGGGTGATC GGCATCGTCG CCTCCCGCAT CGTCGAACTG
TTCCACCGCC CGGTGATCCT CTTCGCCTTC GAGGGGGGGA CCGGAAGGGG GTCGGGGCGG
AGCATCTCCC GGTTCCACCT TTTGGACGCC ATCCGTACTT GCGGCAAACA CCTGCTCCGC
TTCGGCGGGC ACAGCCACGC GGCGGGTCTC TCCATAGCCG AGGAAGAGCT GGACTCTTTC
AGCTTGAGCT TCGAGCAGGC GGCCCAGGCA CTCGACGACG ACGCCCTCAC CCCCACCCTG
GCCTACGACC TGGAGCTACT CCCGGGTGCG GTGGACGAGG CGCTCGTCAC CGAGCTGGAG
CGGATGAAGC CGTTCGGCAT GGGAAACCCC GAGCCGCTCT TTCTGATGAA GGGGGTGCGC
GTCGAGGATT GCCGGGTCCT GAAGGGGGGG CACCTGAAGC TCAAGGTGGT TCACGGCGGG
CGCGCCTTCG AGGCGATCGC CTTCGGGCTC GCCGACAAGG GGGGGGCGCA GCGCGTCGAC
CTGGTCTGCT CCCCCGGGAT CAACGTCTGG AACGGCAAAA GGAGCCTCCA GTTGACCGTA
AAGGATCTGC GCGAGGTGCA TGAGTGCTGA
 
Protein sequence
MQPITHKIWR PREADPAAVD ALTRSGFPAL LARLLANRGI DGEKGAKAYL SPVLSGLENP 
MLMKGMAEAV ERLALARTRH ERVCVHGDYD VDGVTASALL IGFFRAVGID CFPYIPKRLT
EGYGLSPQGV AAAAKGGATV LVTVDCGITS LDEGLLCREA GIDLIVTDHH APGERLPEAL
AVIDPLQPGC PFPFKSLAGV GVAFHLLIAL RARLRADNSF TACEPDLKEY LDLVALGTVA
DVVPLLGPNR ILVSYGLKQL SAGSRVGIAA LKEVAGVTGE VGCGAVGFRL APRINAAGRL
EDAALGLELL LTGDPARARE IAALLDDSNG ERQALERATL DEARAMLEQG ACRGRKSIVL
GSDLWHPGVI GIVASRIVEL FHRPVILFAF EGGTGRGSGR SISRFHLLDA IRTCGKHLLR
FGGHSHAAGL SIAEEELDSF SLSFEQAAQA LDDDALTPTL AYDLELLPGA VDEALVTELE
RMKPFGMGNP EPLFLMKGVR VEDCRVLKGG HLKLKVVHGG RAFEAIAFGL ADKGGAQRVD
LVCSPGINVW NGKRSLQLTV KDLREVHEC