Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1787 |
Symbol | |
ID | 8137118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2077947 |
End bp | 2079656 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644869399 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_003021599 |
Protein GI | 253700410 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.0490686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAA TCACCCATAA AATCTGGCGG CCGCGCGAGG CCGATCCCGC CGCCGTGGAC GCGCTCACCC GCTCGGGTTT CCCCGCACTT TTGGCGCGGC TTCTGGCCAA CCGCGGCATC GACGGGGAAA AGGGAGCGAA AGCCTACCTG TCGCCGGTAC TTTCCGGTCT GGAAAACCCC ATGCTGATGA AGGGTATGGC AGAGGCGGTG GAGAGGCTCG CGCTCGCGCG CACACGCCAC GAACGTGTCT GCGTGCATGG GGATTACGAC GTGGACGGGG TCACAGCCTC GGCCCTTTTG ATCGGCTTTT TCCGCGCCGT CGGCATCGAC TGCTTTCCCT ACATACCAAA GCGCCTCACC GAGGGGTACG GCCTTTCCCC GCAGGGGGTC GCCGCCGCTG CCAAGGGGGG GGCGACGGTG CTGGTCACGG TGGACTGCGG CATCACCTCG CTCGACGAGG GCCTCCTTTG CCGCGAGGCC GGCATCGATC TCATCGTCAC CGACCACCAC GCCCCCGGCG AGCGTCTCCC CGAGGCCCTC GCCGTGATCG ACCCGCTGCA GCCCGGCTGC CCCTTCCCGT TCAAGTCGCT CGCCGGCGTC GGGGTCGCCT TCCACCTTCT GATCGCGCTC CGCGCGAGAC TGCGCGCAGA CAACAGTTTC ACTGCCTGCG AACCCGACCT GAAGGAGTAT CTCGACCTGG TGGCACTTGG CACCGTGGCG GACGTGGTGC CGCTGTTGGG TCCGAACCGC ATCCTGGTGA GCTACGGGCT GAAGCAGCTG TCGGCCGGGT CCCGGGTCGG TATCGCGGCG CTCAAGGAAG TGGCAGGCGT TACCGGGGAG GTCGGCTGCG GCGCCGTCGG TTTCCGGCTC GCGCCGCGCA TAAACGCGGC CGGGCGCCTG GAGGACGCGG CGCTCGGGCT GGAGCTCCTT TTGACCGGCG ACCCCGCCCG GGCAAGGGAG ATCGCGGCTC TTCTCGACGA CAGCAACGGC GAGCGTCAGG CGCTGGAGCG AGCCACACTC GACGAGGCGC GCGCCATGCT GGAGCAGGGG GCCTGCCGGG GGAGAAAGAG CATCGTCCTC GGCTCCGATC TCTGGCACCC GGGGGTGATC GGCATCGTCG CCTCCCGCAT CGTCGAACTG TTCCACCGCC CGGTGATCCT CTTCGCCTTC GAGGGGGGGA CCGGAAGGGG GTCGGGGCGG AGCATCTCCC GGTTCCACCT TTTGGACGCC ATCCGTACTT GCGGCAAACA CCTGCTCCGC TTCGGCGGGC ACAGCCACGC GGCGGGTCTC TCCATAGCCG AGGAAGAGCT GGACTCTTTC AGCTTGAGCT TCGAGCAGGC GGCCCAGGCA CTCGACGACG ACGCCCTCAC CCCCACCCTG GCCTACGACC TGGAGCTACT CCCGGGTGCG GTGGACGAGG CGCTCGTCAC CGAGCTGGAG CGGATGAAGC CGTTCGGCAT GGGAAACCCC GAGCCGCTCT TTCTGATGAA GGGGGTGCGC GTCGAGGATT GCCGGGTCCT GAAGGGGGGG CACCTGAAGC TCAAGGTGGT TCACGGCGGG CGCGCCTTCG AGGCGATCGC CTTCGGGCTC GCCGACAAGG GGGGGGCGCA GCGCGTCGAC CTGGTCTGCT CCCCCGGGAT CAACGTCTGG AACGGCAAAA GGAGCCTCCA GTTGACCGTA AAGGATCTGC GCGAGGTGCA TGAGTGCTGA
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Protein sequence | MQPITHKIWR PREADPAAVD ALTRSGFPAL LARLLANRGI DGEKGAKAYL SPVLSGLENP MLMKGMAEAV ERLALARTRH ERVCVHGDYD VDGVTASALL IGFFRAVGID CFPYIPKRLT EGYGLSPQGV AAAAKGGATV LVTVDCGITS LDEGLLCREA GIDLIVTDHH APGERLPEAL AVIDPLQPGC PFPFKSLAGV GVAFHLLIAL RARLRADNSF TACEPDLKEY LDLVALGTVA DVVPLLGPNR ILVSYGLKQL SAGSRVGIAA LKEVAGVTGE VGCGAVGFRL APRINAAGRL EDAALGLELL LTGDPARARE IAALLDDSNG ERQALERATL DEARAMLEQG ACRGRKSIVL GSDLWHPGVI GIVASRIVEL FHRPVILFAF EGGTGRGSGR SISRFHLLDA IRTCGKHLLR FGGHSHAAGL SIAEEELDSF SLSFEQAAQA LDDDALTPTL AYDLELLPGA VDEALVTELE RMKPFGMGNP EPLFLMKGVR VEDCRVLKGG HLKLKVVHGG RAFEAIAFGL ADKGGAQRVD LVCSPGINVW NGKRSLQLTV KDLREVHEC
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