Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1786 |
Symbol | |
ID | 8137117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2077134 |
End bp | 2077706 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644869398 |
Product | TPR repeat-containing protein |
Protein accession | YP_003021598 |
Protein GI | 253700409 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.0173384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGG AAAATTTACT CACCGTAGCA GTGGCCCTGA TCGTCGGCAT GCTGGGCGGA TACATCATCT TCAACGTGGC CGGCAACAAG AACCTTCCCT CCAACGCCGC TGTGCCGCAG GGGGCGGGTT CCCCCACCGA TTACCAGAGG CGCATCGTCG AAGCAGAGAA GATCGTGGCC CAGGAACCGA AAAACCTGCA GGCCTGGGCG CAGCTCGGCA ACGACTACTT CGACACCGAT CAGCCCCAGA AGGCGGTCAA CGCCTATGCG AAGGTGCTGG AGCTCGATCC CAACAACGTG AACGTCATGA CCGACCAGGG GATCATGTAC CGCAAGATCG GCTGGTACGA CAAGGCGATC GCCAACTTCG AGAAGGCGCA GCAGATCGAC CCCAAGCATC TGCAAAGCCT CTACAACCTG GGCGTGGTCT ACTACATGGA CCTGAAGCAG TACGACAAGG CCAAGGAGGT ATGGACCAAG TACCTGCAGT TCGACTCCAC GAGCCCCACG GCCCAGCAGA TCAAGAACGA CATGGCCAAC CTGACCCAGA TGCCTGGTAG CTTCAAGAGG TAG
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Protein sequence | MSKENLLTVA VALIVGMLGG YIIFNVAGNK NLPSNAAVPQ GAGSPTDYQR RIVEAEKIVA QEPKNLQAWA QLGNDYFDTD QPQKAVNAYA KVLELDPNNV NVMTDQGIMY RKIGWYDKAI ANFEKAQQID PKHLQSLYNL GVVYYMDLKQ YDKAKEVWTK YLQFDSTSPT AQQIKNDMAN LTQMPGSFKR
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