Gene GM21_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1766 
Symbol 
ID8137097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2054722 
End bp2055342 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID644869378 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003021578 
Protein GI253700389 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.00317051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGAAAAG AGACCAAGGC GGTCATCTAC GACTGCGACG GGGTGCTGTT CGACTCCTTC 
GAGGCGAACT ACGCCTTCTA CGGGCAGGTG GTGGAGCACT TCGGCAAGGC GCCCCTGGAC
CGCGGCGACG CCGAACTGAT GCGGATACTG CACACCTACT GCAACAAGGA CGTTTTGTCC
CACATCTTCG CCGGTGAAGA GCGGATGGAC GAGGTGCGGG CTTTCTCGGC CGGCATCGAC
TACAGAAAGC TCTTTCCCCT CATGGTGATG GAGGAGGGGT TGCGTGAGAC GCTTGAGGCG
CTGAAGGGGA GGGTGGAGCT CGCCGTCTGC ACCAACAGGG CCAGCTCCAT GGAGATGCTG
CTGGAAACCT TCGGGCTCGC TCCCTATTTC AGCTGCGTCA TGACCGCCGC GCTGGTGCAA
AACCCGAAGC CCCACCCGGA GCCGCTTTGG AAGGTGCTGG CTCAGTACGG GATCGCCCCT
GAAGAGGCGC TCTTCGTCGG GGATTCCGAG GTGGACCGCC AGGCCGCCGA CGCCGCCGGC
GTCCCGTTTG TCGCCTACCG CGGCGGGATG CGCGCGCTGG CCAGGATCGA GAAGCACCAG
GAACTGCTGT TACTGCTGTA G
 
Protein sequence
MRKETKAVIY DCDGVLFDSF EANYAFYGQV VEHFGKAPLD RGDAELMRIL HTYCNKDVLS 
HIFAGEERMD EVRAFSAGID YRKLFPLMVM EEGLRETLEA LKGRVELAVC TNRASSMEML
LETFGLAPYF SCVMTAALVQ NPKPHPEPLW KVLAQYGIAP EEALFVGDSE VDRQAADAAG
VPFVAYRGGM RALARIEKHQ ELLLLL