Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1766 |
Symbol | |
ID | 8137097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2054722 |
End bp | 2055342 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869378 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003021578 |
Protein GI | 253700389 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.00317051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGAAAAG AGACCAAGGC GGTCATCTAC GACTGCGACG GGGTGCTGTT CGACTCCTTC GAGGCGAACT ACGCCTTCTA CGGGCAGGTG GTGGAGCACT TCGGCAAGGC GCCCCTGGAC CGCGGCGACG CCGAACTGAT GCGGATACTG CACACCTACT GCAACAAGGA CGTTTTGTCC CACATCTTCG CCGGTGAAGA GCGGATGGAC GAGGTGCGGG CTTTCTCGGC CGGCATCGAC TACAGAAAGC TCTTTCCCCT CATGGTGATG GAGGAGGGGT TGCGTGAGAC GCTTGAGGCG CTGAAGGGGA GGGTGGAGCT CGCCGTCTGC ACCAACAGGG CCAGCTCCAT GGAGATGCTG CTGGAAACCT TCGGGCTCGC TCCCTATTTC AGCTGCGTCA TGACCGCCGC GCTGGTGCAA AACCCGAAGC CCCACCCGGA GCCGCTTTGG AAGGTGCTGG CTCAGTACGG GATCGCCCCT GAAGAGGCGC TCTTCGTCGG GGATTCCGAG GTGGACCGCC AGGCCGCCGA CGCCGCCGGC GTCCCGTTTG TCGCCTACCG CGGCGGGATG CGCGCGCTGG CCAGGATCGA GAAGCACCAG GAACTGCTGT TACTGCTGTA G
|
Protein sequence | MRKETKAVIY DCDGVLFDSF EANYAFYGQV VEHFGKAPLD RGDAELMRIL HTYCNKDVLS HIFAGEERMD EVRAFSAGID YRKLFPLMVM EEGLRETLEA LKGRVELAVC TNRASSMEML LETFGLAPYF SCVMTAALVQ NPKPHPEPLW KVLAQYGIAP EEALFVGDSE VDRQAADAAG VPFVAYRGGM RALARIEKHQ ELLLLL
|
| |