Gene GM21_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1726 
Symbol 
ID8137057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp2012468 
End bp2013070 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID644869338 
Productshort chain dehydrogenase 
Protein accessionYP_003021538 
Protein GI253700349 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCA TCGTCGTCGG AGCAACCGGA ACCATAGGAA AAGCCGTGGC CAAGCTTTTG 
TCCACGGAGC ATGAAGTGGC GAGGGTCGCC TTCAGAAGCG GCGACTTCCG GGTGGACATG 
TCGCGGAAGG ATTCCATAGA GTCGATGTTC CAGGAGGTCG GGGAGTTCGA CGCGCTGGTC 
TGCGCGGCCG GAGTCGCCAG GTTCGGCTCC CTGGCTGAAT TGACCGACGA GGACTTCCAG 
ACCGGGCTCT CCGGGAAGCT CATGGGCCAG GTCAACCTGG TTCGGGTGGG AATGCACCAC 
ATCCGGAATA ACGGCTCCTT CACGCTGACC AGCGGGGTCT TGAGCCACCA GCCCATGCCC 
GGAAGTTCCT CCATCAGCAT GATCAACGCC GGGCTCGAAG GGTTTGTCCG GGCGGCGGCG 
CTCGAATTGC CGCGGGGAGT CCGGATCAAC GTGGTGAGCC CCCCTTGGGT CAAAGAGACC 
CTTGAGGCGC TGGACATGGA CAGCTCGGGG GGAATGCCGG CGCAGGACGT GGCGCAGGCC 
TACTGGGCCA GCATACACGG CGCCAGAAGC GGCCTCGTCA TCAACGCCCG GGACTTCGCC 
TGA
 
Protein sequence
MRIIVVGATG TIGKAVAKLL STEHEVARVA FRSGDFRVDM SRKDSIESMF QEVGEFDALV 
CAAGVARFGS LAELTDEDFQ TGLSGKLMGQ VNLVRVGMHH IRNNGSFTLT SGVLSHQPMP 
GSSSISMINA GLEGFVRAAA LELPRGVRIN VVSPPWVKET LEALDMDSSG GMPAQDVAQA 
YWASIHGARS GLVINARDFA