| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1625 |
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| Symbol | |
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| ID | 8136956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1891594 |
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| End bp | 1893807 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869238 |
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| Product | ribonuclease R |
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| Protein accession | YP_003021438 |
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| Protein GI | 253700249 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 148 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG CTAAGGACGC GGTCATGAGG CTTTTGGCCA AGGGGGAACC AATCCCGTAC
CGGCAGATGC TGAAGGCTCT CAATATATCC CGCCGCGACC GTGACCAGTT GGACCAACAA
CTGGACTTCC TGGTCGAATC CGGTGAGATC GTCAAGATGC CGGGGCGCAT CTACGCCCTG
GCTGGCTCCG GCGACGGCGT TCGCGGCAAG CTCTCGGTTC ACCGCGACGG CTACGGTTTC
GTTATGCCGG AGGAGGGAGG GGAGGACCTC TTCGTTCCTG CGCGCTATCT CACCGAGTAC
ATGCACGGCG ATACCGTGGA GGCCCAGGTG GTCTCGACCC GCCGCGACGG CAAACGGGAG
GGGAGGGTGA CCGCCCTGGT GCAGCGGGGC GTCACCGAGA TCGTCGGGCG CTTCGAGGCG
ATAGGCAAGG GGGGAAGGGT GATCCCCGAC GACCCGAAAC TGGGGCGGGA CCTCTTCGTC
ACCCCGGGTG CCGCCGGCGG CGCGGCCAAG GCGAAAGACG GGCAGATCGT GCTGGCGCAG
ATCACCGCCT ACCCTTCGGG CGTCCGTTCG CTGGAGGGAA GGATAGTTGA GGTACTGGGC
GAGGCGAACG ACCCCGAGGT CGAGGCGCTT ACCGTGATCA AGAAGTACGA ACTCCCCCAC
GTCTTCGACG AGAAGGTGAT GGAGGAGGCG AAGAAGCAGC CGCAGCAGGT GACGGAGGAG
GCCCTCTCCG ATCGCACCGA CCTGCGTGCA AGGCTCACCG TCACCATAGA TGGAGAGACG
GCGCGCGACT TCGACGACGC CGTTTCGGTC GCCCGCGAAG GAGACAAAAT CCGGCTCTGG
GTCTCCATCG CGGACGTCTC CCACTACGTC GTCGAGGGCT CAAGGCTCGA CACCGAAGCG
TACCTGAGGG GGACCTCGGT CTATTTCCCG GACCGCTGCA TTCCCATGCT CCCGGAAGAG
CTCTCCAACG GGATCTGCTC GCTGAACCCC CAGGTGGACC GCCTAACCAT GACCGCCGAG
ATGCTCTTCG ACGCCGCCGG CGAGCGGGTC GACGCCCGCT TTTACACGAG CGTCATCAAG
AGCGCCGCGC GCCTCACCTA CACGACGGTG AAGCGGATAC TTGTGGACCG CGACCCCGAG
GCGGTCGAGC AGAACGCCCA CCTTGTCGAA GATCTCAAGG TCATGGAGGA TCTCTCGCTG
CGCCTGAACG CGGTGCGCCG CACCAGGGGG AGCATCGACT TCGACCTCCC CGAGCCCCAG
ATCATCCTCG ACCTGCAGGG GGAGACCACC GCCATCGTCA GGGCCGAGAG AAACCTGGCC
CACCGTATCA TCGAGGAGTT CATGCTCGCC GCCAACGAAG CGGTGGCGGG TTTCCTGGAG
AACACGCCGG TTCCGTCGCT GTACCGGGTG CACGAGAACC CGGACCCGCT GAAGCTGAAG
GACTTGGCCG AGTTCGTCTT CGGCTTCGGC TACATCCTTA AGCTGCAGGA CGAAAAGGTG
AACCCGCTGG AGCTGCAGAA GCTTTTGGCC GAGGTGGAGG GGAAACCCGA GGAGCGCCTG
ATCAACGAGG TGCTTTTGCG CTGCATGAAG CAGGCACGCT ACAGCGCCGA GAACCTCGGG
CACTACGGCC TTGCGGCGGA AAGCTACACC CACTTCACCT CGCCCATCCG CCGCTACCCG
GACCTCGTGG TGCACCGCAT CCTGAAGAGG GTGCTGTCCC AGAAGATGAA GCAGGTGGAC
AAGGACCGGC TTGAGGCGAG GCTTCCCGAG ACGGCGGCGC ATACCAGCAA GAGGGAGCGG
GTCGCCATGG AGGCGGAGCG CGAGATGGTG GATTTGAAGA AGATGCAGTT CATGCGGGAC
AAGATCGGCG AGGAGTACGA CGGCTACATC ACCGGCGTCG CCCAGTTCGG GCTCTTCGTG
GAGCTGGTGG AGCTTTTCGT GGAGGGGATG GTCCCGGTCG CCACGCTCCC GATGGACTAC
TACGTGCACC TGGAGAAGAG CCACGCCCTC GTTGGGGAGA GGAGCCGCGC CATGTACCGC
ATCGCGGACA AGATCAGTGT CAAGGTGGCC GCTGTGAACG AGGCGCGCAA GCAGGTGGAG
TTCTCGCTGG TGGGGACCCT GGAAAAGCGC CCCATCGAGC CGATCCAGGA TGTCAGGAAC
GCCTATGACC GGATACCGGT CAAGGGGAAG CGCCCCAAGC CCCGGCGGCG CTGA
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| Protein sequence | MRKAKDAVMR LLAKGEPIPY RQMLKALNIS RRDRDQLDQQ LDFLVESGEI VKMPGRIYAL
AGSGDGVRGK LSVHRDGYGF VMPEEGGEDL FVPARYLTEY MHGDTVEAQV VSTRRDGKRE
GRVTALVQRG VTEIVGRFEA IGKGGRVIPD DPKLGRDLFV TPGAAGGAAK AKDGQIVLAQ
ITAYPSGVRS LEGRIVEVLG EANDPEVEAL TVIKKYELPH VFDEKVMEEA KKQPQQVTEE
ALSDRTDLRA RLTVTIDGET ARDFDDAVSV AREGDKIRLW VSIADVSHYV VEGSRLDTEA
YLRGTSVYFP DRCIPMLPEE LSNGICSLNP QVDRLTMTAE MLFDAAGERV DARFYTSVIK
SAARLTYTTV KRILVDRDPE AVEQNAHLVE DLKVMEDLSL RLNAVRRTRG SIDFDLPEPQ
IILDLQGETT AIVRAERNLA HRIIEEFMLA ANEAVAGFLE NTPVPSLYRV HENPDPLKLK
DLAEFVFGFG YILKLQDEKV NPLELQKLLA EVEGKPEERL INEVLLRCMK QARYSAENLG
HYGLAAESYT HFTSPIRRYP DLVVHRILKR VLSQKMKQVD KDRLEARLPE TAAHTSKRER
VAMEAEREMV DLKKMQFMRD KIGEEYDGYI TGVAQFGLFV ELVELFVEGM VPVATLPMDY
YVHLEKSHAL VGERSRAMYR IADKISVKVA AVNEARKQVE FSLVGTLEKR PIEPIQDVRN
AYDRIPVKGK RPKPRRR
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