Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1624 |
Symbol | |
ID | 8136955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1889238 |
End bp | 1891367 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869237 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003021437 |
Protein GI | 253700248 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 145 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACC GCACCGCCAT TGCAGCAGCC GCCGTACTTT TCTGCACCGC CCTTCCCGCC TCAGCAGTGA CCTTCAAGCC CGCCGACGAA GCCCTGGCAA GCGCCGCCTC CCGCATGCAG GCCAAGGATT ACCGCACCGC GAAAGAAGCC GCGTCGAAAG TAAACGACAA AGGCGTCCGC AGCTTCATGG TCGGCATGGC GGCGGCCCGG CTGGAGCAGT GGGAGGAGGC GGCAGGCCAG CTTGCCACCG CGGCGGATGC CTACCCCATC CTCGCCGATT ACGCGCTCTA CTACCAGGGG CTCTCCCTAA CCAAGCTGGA GCGGCACGAT CAGGCTCTCA CTCCCTTGTA CCGGCTCCTC AAGCAGTACC CCGAAAGCCG CCTGGTGCGC GCAGCCCTCA TCCTGTACTC CGACACCCTC GCGGCGGCCG GGCACTACAA CGAGGCTCAA CAAAGCTACT CCACCTTCGT CGAGCGTTAC CCGTTGGGCA ACGACTCCAT CTCCGCGCTC TACGGTTCCG CCCTTTGCAA GGAGAAGCTG GGCGACCCGA TTGCGGCGGC GAAAGCCCTG CGCGGCATCT ATCTCAACTA CCCCGCCTCC CCGTTTTCCG ACAAGTCCGC CCGCGACCTG CAAAGGCTTG GAAGCGCCGG TACCAGGGTC GAGCCGTACA CCGGCGCCGA ACTCTTCAAG CGCTGCGGCA CGCTGTACGG ACTGAGACGC TATCTGCAGG CAGCAGAGGC CTACGCGGAG ATACCGCTTT CCGGGGAGAG CGCCGAATTC ATCGCCAAAC TCAAGCTGAA GAAGGGACAG GCGCTCTATA AGGCAAGGCG CTACAAGCAG GCGCAGGCGA CCTTCTCCAA CATCTCCGGC GCCCGCCACG AATCCGACCT CTGGCTGGCG CGGACCCTGG ACAAGACCGG GGAACAGACA GAAGCCTTCA AACTGTACAT GCAGCTGGCG CAGGACTCCG ACAGTGGAAG CACCGGACAG GAGGCGCTCT TGGAGGCGGC GTACCTGAAA AGGTTCCAGC GCAAATGGAG CGAGGCACTG CCGCTTTTCA AGCAATACCT GACAGCCGTG CACCAAAAAC CGTCCAACGT GCTCTGGGAG TCCGCCTGGG CCAGCTACCA GTCCCGCGAT TACGAAGACG CCGCCGCGCA GTTCAAAAAG CTCACCGAGC GCGAGGACCT GCGGGACAAG GCGCTCTACT GGCTGGGCAA GACCCTCGCC GCCGCCGGCG ACGCCAAAGG TGCGCAGCAG GCGTTCTCGA CCCTGGCAGC GGAATTCCCG CTCGGGTATT ACGCCCTGAT CAGCAACAAC CACGCGGGCG AAGAGCTCCC GCTCCCCCCA AAGAGCATCA TGGAGGTCCT CCCCATGCCT TCCGGTTTCG AGCGGGAAAA GGCGCTGATC TCGCTCGGAT TTTACGATGA GGCGGTCAGG GAACTCTCGA TCGGCAAGAA GAACAGGAGC GCGGCGGGGA TCGCCCGGCT CCACCTGGAG ATGGAGAACT TCAACGGCGC CTTCCACGCC ATGTCCAAGG AGAAGCCAAA GCGCGGCGAC AAGGACAGCG CCACCATCTG GGGGGTCACC TATCCGCTCG CATACAAAGA CGACGTAGCG CGCCACGCCG CCGCGAACGC CATACCCGAG AGCCTCGTCT ACGCCGTCAT GCGCGCCGAG AGCAACTACT TCCCGGCGGC CCTCTCGCCC GTCGGCGCCG TAGGGCTCAT GCAGATCATG CCCGCCACAG CCGAATCGAT GTCGAAAGGG GATTCGAAGC GCCTGACCAG TCCGGAGCTG AACATAAGGC TCGGAACCCG TCACCTCAAA GACCTGCTTG ATAGCTACGA CCGCAACCTA ACCCTCACCA TCGCCGCCTA CAACGCCGGC TCCGGCAACG TGAAAAGGTG GCAGAAAGGG TACGGGCACC TGCCGCAGGA CGAATTCGTG GAGAGCATCC CCTTCAGGGA GACGCGCGAG TACGTGAAGA AAGTGGTGAC GGGGATGGAG ATGTACCAGC GGTTGTACCG CCTCCCCCCC TACCAGCAGC CAAACCTGCA TAAGAAGGTG AGCCCCGCAA GCGAGCGGCC GGGCGAACAG AAAGTAGCGC AGGCGGGTTC GACACAGTAG
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Protein sequence | MFNRTAIAAA AVLFCTALPA SAVTFKPADE ALASAASRMQ AKDYRTAKEA ASKVNDKGVR SFMVGMAAAR LEQWEEAAGQ LATAADAYPI LADYALYYQG LSLTKLERHD QALTPLYRLL KQYPESRLVR AALILYSDTL AAAGHYNEAQ QSYSTFVERY PLGNDSISAL YGSALCKEKL GDPIAAAKAL RGIYLNYPAS PFSDKSARDL QRLGSAGTRV EPYTGAELFK RCGTLYGLRR YLQAAEAYAE IPLSGESAEF IAKLKLKKGQ ALYKARRYKQ AQATFSNISG ARHESDLWLA RTLDKTGEQT EAFKLYMQLA QDSDSGSTGQ EALLEAAYLK RFQRKWSEAL PLFKQYLTAV HQKPSNVLWE SAWASYQSRD YEDAAAQFKK LTEREDLRDK ALYWLGKTLA AAGDAKGAQQ AFSTLAAEFP LGYYALISNN HAGEELPLPP KSIMEVLPMP SGFEREKALI SLGFYDEAVR ELSIGKKNRS AAGIARLHLE MENFNGAFHA MSKEKPKRGD KDSATIWGVT YPLAYKDDVA RHAAANAIPE SLVYAVMRAE SNYFPAALSP VGAVGLMQIM PATAESMSKG DSKRLTSPEL NIRLGTRHLK DLLDSYDRNL TLTIAAYNAG SGNVKRWQKG YGHLPQDEFV ESIPFRETRE YVKKVVTGME MYQRLYRLPP YQQPNLHKKV SPASERPGEQ KVAQAGSTQ
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