Gene GM21_1595 details

Gene Information

• Locus tag: GM21_1595
• ID: 8136926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1861018
• End bp: 1862856
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644869208
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003021408
• Protein GI: 253700219
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 82
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAATCAAT TTTATAAGAA CTTGGCGCTC TGGCTTGTCA TCAGCCTGAT GATGATCCTG 
CTGTTCAACC TGTTCAACAA GCCAAAGCCG ACCCAGGAGA AACTCGACTT CAGCGAGTTC 
ATCACGGCTG TAGAGACCGG CAAGGTTAAG AACGTCAACC GCCCGGTCCA ATCGGTCGTG 
ATCCAGGGTA ACGAGATCAT CGGCAAGTTC GCCGACGGCA AGGAATTCAG AAGCTACAAG 
CCTGCCGACG CCAACCTCAC CGACAAGCTG ATCGCCAAGG GGATCGCAGT TTCCGCCCGC 
CCCGAGGAGG AGCGTTTCTC CTGGTTCTCG CTTTTGGTCT CCTGGTTCCC GATCATCTTC 
CTCGTGGCCG TCTGGATCTT CTTCATGCGT CAGATGCAGG GAGGGGGCGG CAAGGCGATG 
GCGTTCGGCA AGAGCCGCGC GAAGCTCCTC ACCGAGGCCC AAGGTCGCGT CACCTTCGAG 
GACGTGGCCG GCATCGAGGA GGCCAAGGAC GAGTTGGAAG AGATCATCAA CTTCCTCAAG 
GACCCCAAGA AGTTCACCAA GCTGGGCGGC CGCATCCCCA AAGGGGTGCT TCTCATGGGC 
CCCCCGGGCA CCGGCAAGAC CCTGCTCGCC CGCGCCATAG CCGGCGAGGC CGGGGTTCCC 
TTCTTCTCCA TCTCCGGTTC CGACTTCGTC GAGATGTTCG TCGGCGTCGG GGCGTCGCGC 
GTACGCGACC TCTTCGTGCA GGGGAAAAAG AGCGCGCCCT GCATCATCTT CATTGACGAG 
ATCGACGCTG TCGGCCGTCA TCGCGGCGCA GGTCTCGGCG GCGGCCACGA CGAGCGCGAG 
CAGACCCTGA ACCAGCTCCT GGTCGAAATG GACGGCTTCG AGTCCAACGA AGGGGTCATC 
CTGATCGCCG CCACCAACCG TCCTGACGTC CTCGACCCGG CGCTGCTCCG CCCGGGGCGC 
TTCGACCGCC AGGTCGTGGT ACCGCGCCCC GACGTGAAGG GTCGCGAGAT GATCCTCAAG 
GTGCACACCA AGAAGACCCC GCTCTCCGCG GACGTCGATC TCGGCGTCAT CGCCCGCGGC 
ACCCCCGGCT TCTCCGGCGC GGACCTCTCC AACGTGGTCA ACGAGGCCGC CCTCATCGCG 
GCGAGGAAAG AGAAGAGCAT GGTCGAGATG ATCGATTTCG ACGACGCCAA GGACAAGGTC 
CTCATGGGTG TCGAGCGCCG CTCCATGGTC ATCTCTGACG AAGAGAAGAA GAACACCGCA 
TACCACGAGG CGGGGCACAC CCTGATCGCC AAGCTGATCC CGGGCACCGA CCCGGTGCAC 
AAGGTCTCCA TCATCCCGCG CGGCAGGGCG CTTGGCGTCA CCATGCAGCT TCCGATCGAG 
GACAAGCACA GCTACTCCCG CGAGTCGCTT CTGGACCGCA TCGCGGTGCT CCTGGGCGGG 
CGCGTGGCCG AGGAGGTCAT CTTCAACTCC ATGACCACCG GCGCCGGCAA CGACATCGAG 
CGCGCCACGG AGATCGCCCG CAAAATGGTC TGCGAGTGGG GCATGAGCGA GAAGCTCGGC 
CCGGTCAGCT TCGGCAAGAA GGACGAGCAG ATCTTCCTCG GGCGCGACAT GGCGCACCAG 
AAGAACTACT CGGAGGCGAC CGCCATCGAG ATCGACCACG AGATCAGGCT GATCGTGGAG 
CAGAACTACG CACGGGTGCA GGATCTGCTC AAGGCGAACC TCGATTCGCT GCACAAGATC 
TCCCTCGCGC TCATCGAGCG CGAGAACCTC TCGGGCGACG AAGTCGACCG TATCATCGCC 
GGCGAGCAGC TCGCGCCGGA ACCGGCCGCC GCGGAGTGA 

 

Protein sequence

MNQFYKNLAL WLVISLMMIL LFNLFNKPKP TQEKLDFSEF ITAVETGKVK NVNRPVQSVV 
IQGNEIIGKF ADGKEFRSYK PADANLTDKL IAKGIAVSAR PEEERFSWFS LLVSWFPIIF 
LVAVWIFFMR QMQGGGGKAM AFGKSRAKLL TEAQGRVTFE DVAGIEEAKD ELEEIINFLK 
DPKKFTKLGG RIPKGVLLMG PPGTGKTLLA RAIAGEAGVP FFSISGSDFV EMFVGVGASR 
VRDLFVQGKK SAPCIIFIDE IDAVGRHRGA GLGGGHDERE QTLNQLLVEM DGFESNEGVI 
LIAATNRPDV LDPALLRPGR FDRQVVVPRP DVKGREMILK VHTKKTPLSA DVDLGVIARG 
TPGFSGADLS NVVNEAALIA ARKEKSMVEM IDFDDAKDKV LMGVERRSMV ISDEEKKNTA 
YHEAGHTLIA KLIPGTDPVH KVSIIPRGRA LGVTMQLPIE DKHSYSRESL LDRIAVLLGG 
RVAEEVIFNS MTTGAGNDIE RATEIARKMV CEWGMSEKLG PVSFGKKDEQ IFLGRDMAHQ 
KNYSEATAIE IDHEIRLIVE QNYARVQDLL KANLDSLHKI SLALIERENL SGDEVDRIIA 
GEQLAPEPAA AE