Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1578 |
Symbol | |
ID | 8136909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1839356 |
End bp | 1841845 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869191 |
Product | histidine kinase |
Protein accession | YP_003021391 |
Protein GI | 253700202 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCACGCT TCACCCTCTT CAAAAAGATC CTGGTCATCA CGCTGCTGCT CTCCCTGCTG CCGCTGTTCG TCTCCTCCGC CATTCTCCTG ATGAACCTGC AGTCGATCAG CACCAAGCTC ACCGACGAGA TAGCACGTTC GGACGACCGG CAGGCGACCC AGTCGCTGCA GGTGAAGGCG CGGGACCTGG CCGAAAACAT CCGCGATTTC CTGCACCAGT GCGAAAGCGA CCTGCTCTTT CTTTCCGGCT CCCGCCTGGA CCGCTCGACG CTGCTCCACT TCTATCAGAC CCGCCTGAGC GAGGTGTGGC AGCGCGGAGG GAGCGCCACC GCGGCCCAGG GAACCCACGA GTTCCGCCCC ATCTACCGCT CCATCGCCAT CATCGACGGC AACGGCATGG AACAGACGGT GGTCCGAAAC GGCCAGTTCG TCCCCAAAGA GCGACTGCGC AACGTTGCGG ACCCTGCCAA CACCGAGTTC AAGAGCGAGG ATTACTTTCA CCGCGTGCGG GCGCTAAAAC CCGGCGAGAT CTACGTCTCG CACCTCACCG GTTTTCACGT CTCCAAGCAG GAGCAACTCT CCGGGGCCAA AGACCCGGAA AGCGCCTACG ACGGCAAGAG CTACCAGGGG GGCATCCGGT TCGGCTCTCC ACTTTACGAT TCGAAGGGGA AGTTCTCCGG CATGGTGCTG CTGACGCTGG ACCATCAGCA CCTCATGGAA TTCACCCAGC ACATCGACCC GGGCAAGGGT TTCGCCACCC TCTTCCCCTC CTACCAAAGC GGCAACTATG CGTTTCTCTT CGACGACGAG GGGTGGATCA TCACCCATCC CAAGTTCTGG GACCTCCGCG GGGTGGACCA AACGGGGAGA CCGGTACCGC CTTACACGGC GCATTCCAAA AAGGAGGACG TCGACAGCGG CCGCATCCCC TTCAACCTGA ATCACGCAGG TTTCATCCAC AAAAGCTACC CCGTGGTCTC CGCCGCCGTC AGGAACCGGC AGGAAGGGTA CGTCGACATC ACCAACGTGG GGGGCGCCAA GAAGATCATG GCCTACGCTC CCATCTTCTA CGACACCGGG GACTACGCAA GGCACGGGGT CTTCGGCGGC GTGACCATCG GGTTCCAGGT GGACCAGTTT CACGAGGCGT CCCGCAAGGG AAGCCGGCTC ATCGACAGGC AACTGGGGGA GCACCGCCGA ACCAGCGCCC TCATCATCCT GGCCACCGCC CTGGTCTCGG CGCTCTCTGC CTGGCTCTTG TCCCGCGGCA TCAGCATCCC CCTTCGACAG CTAACCGAAA GCGCCGGCAA GCTGGCCGCA GGCGACAGCC ACGTCAGAGT GGCGGTGAAT TCAAGCGACG AAATAGGGGT CCTCGCCAAC ACCTTCAACT ATATGGCTGA CGAGCTGGAC CTCAGGAAGC AGAGCATACT CTCAACGCTG GACGAATTGC GCAAGTCGCG GCTGGAGATC CTCGATGAGC GCAACTTCAA GGAGAGCGTG CTGGAAAGCA TCTCCAGCGG CATCGTCACC TTTTCCCCCC AGGGGCGCCT CACCTCCATC AACCGGACCG GCCGCCTGTT CCTCGGCGAT GGGCTCGCAA AAGAGACGCA TTACACAGAG GTTTTCAAGG GGTGGGGCGT CCTGAACGAG CGGATCTCGC AGGTCCTGTC GAAACAGTCG GGGTACGGGC GCGAGACCTT CCGCTTCGAT CACAGCCCCG GCAAGACCCA TTTCGACGTG GGGTTCTTCC CCATCGGCGC CGACGCGGAG CAGGGGCTCA CCGTGACGCT GAGAAACGAG ACGCAGCGGG AAAACCTCCA AGAGGAGATG ATGCGCCTGG ACCGCCTCGC CTCGCTGGGC AAACTTTCCG CGGGCATCGC CCACGAGGTG AGAAACCCGC TCACCGGAAT ATCGTTGCTG CTGGACGACC TGCACGACCA GGCGAGCTCA AGCCCTGAGG ACCGGGACCT GATCAAGAAG GCCCTGGCGG AAATCGAGCG GGTGGAAAAG CTGGTGAACG CGCTTTTGAA CTACTCCTCG CCGGTGCGCG CCGACTTCAG GGAGTGCGAC CTGAACCGCC TGGTCTGCGA CACGGTCCTC CTGATGCGGC GCCAGTGCGA GCGGCAGAAA GTGCAGTTGA GCGTGGCGGA GGGGGAAGTC CCGCCGCTTC GGCTGGACCC GGAAAAGATA AAACAGGCCG TGCTGAACAT CGTCAAAAAC GCCCAGGAAG CACTCCCGGA GGGGGGGCGG ATCGAGGTGG CCACCTCGGT CCAGGACGGG TACGCGGTGA TCGGCATCGG CGACGACGGG CGAGGCATCG CCTCCCGCGA CCTGCCGCTC ATCTTCGAGC CCTTCTTCAC CAAAAAGGGG GCCGGTACCG GCCTTGGACT CTCCATCACC CAGAGGATAG TAGAAGAACA TCGAGGGAAG ATCCGCGTGG AAAGCGCACC GGGAGCAGGG ACGAGGTTCA CCATCGAATT GCCTCTATGA
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Protein sequence | MPRFTLFKKI LVITLLLSLL PLFVSSAILL MNLQSISTKL TDEIARSDDR QATQSLQVKA RDLAENIRDF LHQCESDLLF LSGSRLDRST LLHFYQTRLS EVWQRGGSAT AAQGTHEFRP IYRSIAIIDG NGMEQTVVRN GQFVPKERLR NVADPANTEF KSEDYFHRVR ALKPGEIYVS HLTGFHVSKQ EQLSGAKDPE SAYDGKSYQG GIRFGSPLYD SKGKFSGMVL LTLDHQHLME FTQHIDPGKG FATLFPSYQS GNYAFLFDDE GWIITHPKFW DLRGVDQTGR PVPPYTAHSK KEDVDSGRIP FNLNHAGFIH KSYPVVSAAV RNRQEGYVDI TNVGGAKKIM AYAPIFYDTG DYARHGVFGG VTIGFQVDQF HEASRKGSRL IDRQLGEHRR TSALIILATA LVSALSAWLL SRGISIPLRQ LTESAGKLAA GDSHVRVAVN SSDEIGVLAN TFNYMADELD LRKQSILSTL DELRKSRLEI LDERNFKESV LESISSGIVT FSPQGRLTSI NRTGRLFLGD GLAKETHYTE VFKGWGVLNE RISQVLSKQS GYGRETFRFD HSPGKTHFDV GFFPIGADAE QGLTVTLRNE TQRENLQEEM MRLDRLASLG KLSAGIAHEV RNPLTGISLL LDDLHDQASS SPEDRDLIKK ALAEIERVEK LVNALLNYSS PVRADFRECD LNRLVCDTVL LMRRQCERQK VQLSVAEGEV PPLRLDPEKI KQAVLNIVKN AQEALPEGGR IEVATSVQDG YAVIGIGDDG RGIASRDLPL IFEPFFTKKG AGTGLGLSIT QRIVEEHRGK IRVESAPGAG TRFTIELPL
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