Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1566 |
Symbol | |
ID | 8136897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1823304 |
End bp | 1826447 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644869179 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003021379 |
Protein GI | 253700190 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC GTCTGATCCT CTTCGCATGT CTGCTTGCCT CCGTCTACAC GGCGTCGGCC GCCGGTAATC CCCAGAAAAC GCTCGTTGTA GGCAGCGAGG AGAACTTTCC TCCCTTCTCC ATCGGCAGTA CCGACGATAC TGCCGGCGGT TTCGCCGTGG AGCTTTGGAA GGAGGTTGCC CGGGAGGCGG GGCTGAAATA TACCATCAAG GTCAGGCCGT GGGGTGAACT GCTCCAGGAT TTCCGGGACG GGAAGGTCGA CGTCCTGATC AATATCGCCA CCTCCGAGGA GCGGCATCGC TACACCGATT TCAGCGTCCC GCACGTCACC GTCAACGGCG CCATCTTCGT GCGCAAGGGG GACTCCCTCA TAAGCTCCGA GGCGGACCTG GCGGGGAAGT CCATCATCGT GTTCAAATCC GACCTGGCCC ATGAATACGC GGTCTCCAAA GGACGGCAAA AACAACTGGT GCTGGTCGAC GACGCCCGTG AAGGGCTCAG GCTCCTTTCC TCCGGTAAGC ACGACGCCAT GCTGCTCAGC AAGCTTGCCG GGATGCAGAC GCTGCGGGAA CTCGGCATCG ACAACGTCCG GGCCTTGGAC ATCAAGGCCG GCTACGCGCA GAAGTTCACT TTCGGCGTGC ACAAAGGGGA CTCGGACCTC CTCGCCGCGC TGAACGAGGG GCTGGCCCTG GCCAAGGCTG GCGGGGAGTA CGACAGGCTG TACCAAAAAT GGTTCGGCGT GTACGAGACT AAGGAGCCGA CCTTTATAGA CATATTGAAG TACCTGCTTC CCTTCGCGCT CTTCGTGGCT TGCCTTGCCG TCTATTTCTT CTACAGGCGA AGCCGTGAAC GCAAAGAGTC CGAAGCTGCG TTGCGCGAAA GCAAGCTGCG CCTGGACACC ATCCTCGACA ACGTCGGCGC CCACATCTTC ATAAAGGACA CCGAGTACCG CTACACCTAT GTGAACCGCA AGGTCTGCGA GTTGTTCGGT CTACCCGAGG AAATGATCGT GGGCAAGAGC GACGCCGCCT TCTTCTCCCC GGAATCGGTG GAGGAGATAA TCGTCAGCGA CCGACCGGTG CTCGAGGAGG GGCTCACGGT AAAAAGGGAA GAAATCAACC TGGCGGCCGA GAACGAGCAG CCTCACAGTT ATTGGACGGT GAAGCTCCCC CTCCGGGATG GAAGCGGCGC CATATACGGC CTTTGCGGCA TATCGACCGA CATCACCGAA CTGAAGCTGC TCGAGGACGA GGTGAAGAAG AAGAGCGCAC AGCTTGAGGA GGAACTGGCG GAGCGGGAGA TCGCGCAGGA ATCGCTGCAG GAGCAGACTG CACTGCTCGA GGAGGAGGTC GAGGAACGCA GGAGGGCCGA GGTCGCGCTC AAAAAGAGCG AGGAGACCGT TCGGCACAAA CTAAAGGCGA TCCTGGAACC GGAAGGGGAT ATCGGCGCCC TGGAACTCTC GGATATCATC GACTGCGAAA TGCTCCAGGC CATGATGGAG GATTTCTACA GGATCACGGG GATGTTGGGG GCAGTGGTCG ACGTCTCGGG CAAGGTGCTG GTCGCGGTAG GGTGGCAGGA CATCTGCACC AAGTTCCACA GGGTCCATGC CGAGGCATGC AAAAACTGCC TGGAAAGCGA CACCGTACTT ACCGAAGGGG TGGCCGCGGG AACCTACAAA CTCTACCGCT GCAAGAACAA CATGTGGGAT ATGGTGACTC CCATCGAGGT GGGGGGGAAG CATCTCGGCA ACGTCTTCAT CGGGCAGTTC TTCTACCAGG ACGACCCGCC CGATGTGGAG TTTTTCCGCG AGCAGGCCAG GCGCTACGGG TTCGACGAGA CGCAGTACCT GGCCGCGCTG GATCGGGTGC CTCGTTTCAC CAGGGAAGCG GTTGACGCGG GGATGAAATT CTACGCCGAA CTGACCAAGG TGGTTTCCAC GCTCAGTTTC ACCTCGATAA AGTTGTCCAG GATGCTTGCC GAGCGCATCC ACCTCGAAGA ACAGCTCCGG CAGTCCCAGA AGATGGAGGC GGTGGGACAA CTGGCCGGCG GCGTCGCCCA CGACTTCAAC AACATCCTGC AGGTGATCAC CGGCTACGGC AACATGCTCA AGATGAATGA AAACCTCGGC ATTAAACAAC AGGAATGGGT GGATCATATC CTGTCATCGG CTGAACGTGC GGCGCAGCTT ACCAAGGGAT TGCTGGCCTT CAGTCGCAAG CAGTTGATCT GCCTGGAACC CGTGGATCTG AACGAGGTCA TCGAGAACTT CAAGAAATTC ATCCTCAGGG TCATCGGAGA GGACATACAC TTGAAGACGG TAACCTACGG GGACCGTCTC ATCGTGCACG CCGACGTGGG GCAACTTGAG CAGGTGCTGA TCAACCTGGC GACCAATGCG CGCGATTCCA TGCACAAAGG GGGAATACTG ACTATCGAGA CGGGGCTGCA GACGGTGGAA GCACCCTTTG ACCACGAGTT CGGACGGGCG GAATCGGGAC GCTATGCTGT GGTAACCGTG TCGGACAGCG GCAGCGGCAT GGATGAGGAG ACCCGCAAGA GGATCTTCGA GCCGTTCTAT ACCACGAAGG AGGTCGGCAA GGGGACCGGC CTCGGCATGG CGATCGTCTA TGGCATCATC AAGCAGCATC GCGGGATCAT CAACGTCTAC AGCGAGCCCG GGCACGGCAC CACCTTCAGG ATTTACCTGC CGGTGCAGGA GGCCGAACTG GGCGGGGTGT ATCCCCAGGC CGTGCAGGTG CAGGCGCCGA TGGGGGGAAG TGAAACGATC CTTTTGGCCG AGGATGATGC GGAAGTCCGC AAGCTCGTGG TGTCCATCCT TTGCCAGTAC GGCTACGAGG TGATCCAGGC GGTGGACGGT CAAGATGTCG TCGAGAAGTT CGCCGACAAT AGGGAAAAGG TAGCGATGAT TCTCATGGAC ATGATCATGC CGAAAAAGAA CGGCAAGGAG GCCTACGAGG AGATCTCGCT GCTGCAGCCG GGGGTGAAGG TGATGTACTC GAGCGGCTAT ACCGCGGACT TCATCCAGAA CAGAGGGGTG TCGGAAGAGG GGATCGAACT GGTCATGAAA CCGGTGCAGC CGATGGAACT GCTGCGCAAG ATCAGGGAGA TGCTGGACCG CTGA
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Protein sequence | MLKRLILFAC LLASVYTASA AGNPQKTLVV GSEENFPPFS IGSTDDTAGG FAVELWKEVA REAGLKYTIK VRPWGELLQD FRDGKVDVLI NIATSEERHR YTDFSVPHVT VNGAIFVRKG DSLISSEADL AGKSIIVFKS DLAHEYAVSK GRQKQLVLVD DAREGLRLLS SGKHDAMLLS KLAGMQTLRE LGIDNVRALD IKAGYAQKFT FGVHKGDSDL LAALNEGLAL AKAGGEYDRL YQKWFGVYET KEPTFIDILK YLLPFALFVA CLAVYFFYRR SRERKESEAA LRESKLRLDT ILDNVGAHIF IKDTEYRYTY VNRKVCELFG LPEEMIVGKS DAAFFSPESV EEIIVSDRPV LEEGLTVKRE EINLAAENEQ PHSYWTVKLP LRDGSGAIYG LCGISTDITE LKLLEDEVKK KSAQLEEELA EREIAQESLQ EQTALLEEEV EERRRAEVAL KKSEETVRHK LKAILEPEGD IGALELSDII DCEMLQAMME DFYRITGMLG AVVDVSGKVL VAVGWQDICT KFHRVHAEAC KNCLESDTVL TEGVAAGTYK LYRCKNNMWD MVTPIEVGGK HLGNVFIGQF FYQDDPPDVE FFREQARRYG FDETQYLAAL DRVPRFTREA VDAGMKFYAE LTKVVSTLSF TSIKLSRMLA ERIHLEEQLR QSQKMEAVGQ LAGGVAHDFN NILQVITGYG NMLKMNENLG IKQQEWVDHI LSSAERAAQL TKGLLAFSRK QLICLEPVDL NEVIENFKKF ILRVIGEDIH LKTVTYGDRL IVHADVGQLE QVLINLATNA RDSMHKGGIL TIETGLQTVE APFDHEFGRA ESGRYAVVTV SDSGSGMDEE TRKRIFEPFY TTKEVGKGTG LGMAIVYGII KQHRGIINVY SEPGHGTTFR IYLPVQEAEL GGVYPQAVQV QAPMGGSETI LLAEDDAEVR KLVVSILCQY GYEVIQAVDG QDVVEKFADN REKVAMILMD MIMPKKNGKE AYEEISLLQP GVKVMYSSGY TADFIQNRGV SEEGIELVMK PVQPMELLRK IREMLDR
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