| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1557 |
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| Symbol | |
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| ID | 8136887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1815755 |
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| End bp | 1816756 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644869170 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003021371 |
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| Protein GI | 253700182 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.389546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAACG AAGAGCATTT AGAGGAGAAG GAACCTCTAT TCCTGGACGC CGAGCAGGAC
CCCGACTCAC TCGAACTGGA GGAAGTCGAG GCTGAAGCCG ATGAACCTGC CGAGGTAGAG
GAAGAGGAAA TCAAGGCCGC GGTGGTGGAG CATTTCGATG ACGCCATCAA GCTCTACCTG
CGCGAAATCC AGAAGACCAA GCTCCTCACC GCCGACGAGG AGAAGGAGTT GGCCGCGCGC
ATTGACCTGG GCGACAAGGC CGCCCGGGAC CGGATGATCG TCTCCAACCT CCGCCTGGTG
GTGAAGATCG CCAAGCGCTA CATAAACCGC GGGCTCCCCT TCCTGGACCT GATCGAAGAA
GGGAACATGG GGCTCATCAA GGCGGTCGAG CGCTTCAAGC TCTCCAAGGA GTGCCGCTTC
TCCACCTACG CCACCTGGTG GATCCGGCAG TCCATCGAGC GCGCGCTGGT GAACCAGTCG
CGCACTATCC GTCTGCCGGT GCACGTCTCC GACGACATCA ACAAGATGCT AAGGGTGACG
CGCGAGCTGG TGCAGAAGAT GAACCGCGAG CCGACCATCA AGGAAGTCGC CGACACCCTT
GAAGTGAACA TCACCTACGT GCGCAGGCTC ATGGTCCTCT TGAAGAAGAC CTACTCCATC
GAGCGTCCCA TGGGGGAGAA CAACGACTAC TTCCTCATCG ACACCATAGA GGACACCTCC
ACCATATCGC CCGCGGTACT TCTGGAAGAC CTCAACAAGT ACGAGCTGGT CTCCAAGTGG
TTCGAGACCC TCTCCGACGC CGAGAAAAAG ATACTCACGC TCCGTTTCGG TCTCGACGAC
AAGGACCCCC AGACCCTCGA CACCATCGGG CGCAGCTTCG GGGTGACCCG CGAAAGGATC
AGGCAGATCG AGGCGAAATC GCTGGAAAAG CTGAGAAAGA TAGTGGAAGC GACCGACATC
ATGGGGCGCC CGGCCGTCCC CCCGACAACT ACAGGCACAT AA
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| Protein sequence | MENEEHLEEK EPLFLDAEQD PDSLELEEVE AEADEPAEVE EEEIKAAVVE HFDDAIKLYL
REIQKTKLLT ADEEKELAAR IDLGDKAARD RMIVSNLRLV VKIAKRYINR GLPFLDLIEE
GNMGLIKAVE RFKLSKECRF STYATWWIRQ SIERALVNQS RTIRLPVHVS DDINKMLRVT
RELVQKMNRE PTIKEVADTL EVNITYVRRL MVLLKKTYSI ERPMGENNDY FLIDTIEDTS
TISPAVLLED LNKYELVSKW FETLSDAEKK ILTLRFGLDD KDPQTLDTIG RSFGVTRERI
RQIEAKSLEK LRKIVEATDI MGRPAVPPTT TGT
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