Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1552 |
Symbol | |
ID | 8136882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1811645 |
End bp | 1812382 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869165 |
Product | RNA methyltransferase, TrmH family, group 1 |
Protein accession | YP_003021366 |
Protein GI | 253700177 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000140105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTGA AGCAAAGAGT ATCCGTCGTT TTGGTCGGGA CCCAGAGTCC CGGCAATATA GGCATGGTCT GCAGGGCTAT GAAGAACATG GGGCTCTCCG ACCTGCGCCT GGTAAATCCC TGCCAGGTCG ATCATCTGGA CGCGGTCAAG TTCGCCGTGT CCGCACGCAA TCTACTAGAC TCGGCCCGGA TCTTCACCTC CCTCGAAGAC GCCCTTGCCG ACTGCGAGTT CTCCGTTGCC ACCACCAGGC GCCACGGCAA ATACCGCAAC GAGATCTCCA CCCCGGCGGA GATCGTGGAG CGCTTTTCCG CCTGCGCGCC GGCGAGCCGC CTGGCGCTGG TCTTCGGGCG CGAGGACAGC GGCCTCACCA CCGACGAGGT CGCCCTTTGT CGTTGGCAAT CGACCATCGA GACCGCGGAC GAATTCGGCT CATTGAACCT TTCGCAAGCC GTGCTCATCT TCTGCTACGA ATTTCTCAAA GGCGTCGCAC CCGCACCTGC GAAACAGGCC CGCGAGCTTG CCGGGTCCGC TTCCCTTGAG CCGCTGTACC AGCATATGGA GCGCTCCTTC CTGAGGATCG GCTACCTAAA CCCGCAAAAC CCCGATCACA TGATGCGGAC CCTGCGTCGC ATCTTCTCCC GCGCCGAACT CGACGAGCGC GAGGTGTCCT CGCTGCGCGG GCTCCTCTCC CAGATGGACT GGGCCTGCGC CGAGTTCAAA GGGAAGAAGG GCGAATGA
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Protein sequence | MDLKQRVSVV LVGTQSPGNI GMVCRAMKNM GLSDLRLVNP CQVDHLDAVK FAVSARNLLD SARIFTSLED ALADCEFSVA TTRRHGKYRN EISTPAEIVE RFSACAPASR LALVFGREDS GLTTDEVALC RWQSTIETAD EFGSLNLSQA VLIFCYEFLK GVAPAPAKQA RELAGSASLE PLYQHMERSF LRIGYLNPQN PDHMMRTLRR IFSRAELDER EVSSLRGLLS QMDWACAEFK GKKGE
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