Gene GM21_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1552 
Symbol 
ID8136882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1811645 
End bp1812382 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID644869165 
ProductRNA methyltransferase, TrmH family, group 1 
Protein accessionYP_003021366 
Protein GI253700177 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000140105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTGA AGCAAAGAGT ATCCGTCGTT TTGGTCGGGA CCCAGAGTCC CGGCAATATA 
GGCATGGTCT GCAGGGCTAT GAAGAACATG GGGCTCTCCG ACCTGCGCCT GGTAAATCCC
TGCCAGGTCG ATCATCTGGA CGCGGTCAAG TTCGCCGTGT CCGCACGCAA TCTACTAGAC
TCGGCCCGGA TCTTCACCTC CCTCGAAGAC GCCCTTGCCG ACTGCGAGTT CTCCGTTGCC
ACCACCAGGC GCCACGGCAA ATACCGCAAC GAGATCTCCA CCCCGGCGGA GATCGTGGAG
CGCTTTTCCG CCTGCGCGCC GGCGAGCCGC CTGGCGCTGG TCTTCGGGCG CGAGGACAGC
GGCCTCACCA CCGACGAGGT CGCCCTTTGT CGTTGGCAAT CGACCATCGA GACCGCGGAC
GAATTCGGCT CATTGAACCT TTCGCAAGCC GTGCTCATCT TCTGCTACGA ATTTCTCAAA
GGCGTCGCAC CCGCACCTGC GAAACAGGCC CGCGAGCTTG CCGGGTCCGC TTCCCTTGAG
CCGCTGTACC AGCATATGGA GCGCTCCTTC CTGAGGATCG GCTACCTAAA CCCGCAAAAC
CCCGATCACA TGATGCGGAC CCTGCGTCGC ATCTTCTCCC GCGCCGAACT CGACGAGCGC
GAGGTGTCCT CGCTGCGCGG GCTCCTCTCC CAGATGGACT GGGCCTGCGC CGAGTTCAAA
GGGAAGAAGG GCGAATGA
 
Protein sequence
MDLKQRVSVV LVGTQSPGNI GMVCRAMKNM GLSDLRLVNP CQVDHLDAVK FAVSARNLLD 
SARIFTSLED ALADCEFSVA TTRRHGKYRN EISTPAEIVE RFSACAPASR LALVFGREDS
GLTTDEVALC RWQSTIETAD EFGSLNLSQA VLIFCYEFLK GVAPAPAKQA RELAGSASLE
PLYQHMERSF LRIGYLNPQN PDHMMRTLRR IFSRAELDER EVSSLRGLLS QMDWACAEFK
GKKGE