| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1517 |
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| Symbol | |
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| ID | 8136846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 1772254 |
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| End bp | 1773606 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869129 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_003021331 |
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| Protein GI | 253700142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.00684484 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTAGCC AGAAATGGAC CAAATCGAGC TGGCGTTCTT TTCGCGCCTT GCAGCAACCG
GTATGGCCGG CGGGATCGGC GCTGGAGGAG ACGCAGAAGA CGCTGTCCCA GCTCCCGCCG
CTGGTGTTCG CAGGCGAGTG CCAGACCCTG AAGGCGCAGT TGGCCGACGC CGTGGAAGGC
CGCGCTTTCG TGCTGCAATG CGGCGACTGC GCCGAGGATT TTTCGCGCTG CACCGGCCCC
GACATCAGGG AGCTCTTGAA GGTGATCCTG CAGATGTCGG TGGTGCTCGC CTTTGCCGGC
GAGAAGCGGG TGATCAAGAT AGGGAGGATC GCCGGGCAGT ACGCGAAACC GCGCTCGTCC
GACACCGAGA TGGTGCACGG GATCGAGCTC CCCAGCTACC GCGGCGACAT GGTGAACAGT
CCCGAGCCGA CCCTGGAGGC GAGGACCCCC GACCCGCGCC GAATGCTGGA GGGGTATTAC
CGGGCAGCGG CGACGCTGAA CCTGGTTCGC TCCTTCACGC TGGGAGGATA CGCCTCGCTG
GAGCGGGTGC AGGCCTGGCA CCGCGCCTCG CTCGATGCCC TTCCGGCCGG GCAGAAGTAC
GAGGATCTGG TCCGGCAGAT CTGGAAGACC ATCAACTTCA TGACGGCCAT AGGCCTCGAC
CCTCAGCACA CCCCGCAGTT GAACCAGGTG ACGCTCTACA CCTCGCACGA GGCCCTCTTG
CTCGACTACG AGGAGGCGCT CACCCGTATG GATTCGACCA GCGGGGGGTG GTACGACTGC
AGCGCGCACA TGCTCTGGAT CGGCGACCGG ACGAGACAGC TGGACGGGGC GCATGTCGAG
TTCCTGCGCG GGGTGAAAAA CCCGCTGGGG ATGAAGGTGG GGCCAAGCTA CGACATCGAC
ACGGTGAAAG CGCTGGCGCA GCGGTTGAAC CCCGACAACG AGCCGGGGCG GCTCACTCTG
ATCACCCGCT TCGGCGCCGA CAAGATCGAT TCCTACCTCC CCAGGCTTTT GAAAGAGATG
AAGCAGGAGG GGTTCAAGGT GGTCTGGAGC TGCGACCCCA TGCACGGCAA CACCTACCAG
AACGAGTATG GCCAGAAATC CAGGAAGTTC GAGGACATCC TGCGGGAAAT CAAGAATTTC
CAGCAGATAC ACAAGGCGGA GGGGACCGTT GCCGGAGGGG TGCACCTGGA GCTCACCGGC
GACCACGTAA CCGAGTGCAC CGGGGGGAGC CGGCAGCTTT TGGACAAGCA TCTGCACCTG
AACTACCAGA CCAACTGCGA TCCGCGCCTG AACGCCGAGC AGAGCGTGGA GCTCGCCTTC
GAGCTTGCCG AGATGCTGCA TCCCTGCAAG TGA
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| Protein sequence | MPSQKWTKSS WRSFRALQQP VWPAGSALEE TQKTLSQLPP LVFAGECQTL KAQLADAVEG
RAFVLQCGDC AEDFSRCTGP DIRELLKVIL QMSVVLAFAG EKRVIKIGRI AGQYAKPRSS
DTEMVHGIEL PSYRGDMVNS PEPTLEARTP DPRRMLEGYY RAAATLNLVR SFTLGGYASL
ERVQAWHRAS LDALPAGQKY EDLVRQIWKT INFMTAIGLD PQHTPQLNQV TLYTSHEALL
LDYEEALTRM DSTSGGWYDC SAHMLWIGDR TRQLDGAHVE FLRGVKNPLG MKVGPSYDID
TVKALAQRLN PDNEPGRLTL ITRFGADKID SYLPRLLKEM KQEGFKVVWS CDPMHGNTYQ
NEYGQKSRKF EDILREIKNF QQIHKAEGTV AGGVHLELTG DHVTECTGGS RQLLDKHLHL
NYQTNCDPRL NAEQSVELAF ELAEMLHPCK
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