| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1445 |
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| Symbol | |
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| ID | 8136773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1701910 |
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| End bp | 1703106 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644869057 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003021260 |
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| Protein GI | 253700071 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATAT ATCTCACAGC CGAGGTCCCT GGGACCGGTG GCGTCATCAA AGCAACACCG
GAAGATTTCC TGGTCGAGGA GATTCCGGCC TATCTGCCGA GCGGGCAGGG GGAGCACTGT
TTCGCGGTCC TGGAAAAGCG CGGCATCGCG ACGCTTGAGG CGCTGCGCCG ACTCGCTAAG
GCTCTGGGTG TCCAGGAGCG CGATTTGGGC TACGCCGGGA TGAAGGATGC CATTGGCATC
ACCCGCCAGA CCATTTCCAT ACCGCGCGTG GCGCCCGAGA AGGTGCTCGC GCTTGAAATT
CCGGGGATCA CGGTTCTCTC GGCCAGTATG CATGGCAACA AGTTGAGGCT CGGGCATCTC
AAGGGAAACC GTTTCGTCAT CAGGGTACGC GACGTCGCCC AGGGCGCGGC CGGAAACGCG
GAGGCCGCGC TGGAGATCAT GACCAGGCGC GGGGTACCCA ACCGCTTCGG GGTCCAGCGC
TACGGTGCCC AAGGCAACAC CCACGAGATC GGGGCGGCCA TGCTGCGCCG CGAGTTCAAG
TCGGCGGTGG ACCGGCTGAT CGGCGATCCG GCTGCGGTGA CCGACGAGCG TTGGCGTCTG
GCGATCGAGG CGTACCGGCG CGGGGAAGTG GCCGAGAGCC TCGCGCTGTT CCCGGGACAT
TTCCGGGTCG AGCGCGAGCT GCTCACCCGG TTGGTACAGC GGCCGGACGG CTTCGAGAGG
GCCTTCAACT CGGTGCAGCC GCGCATGAAG AGGCTGTACC TCTCCGCCTT CCAGTCCTCG
CTCTTCGACC TGGTGCTGGG AAAAAGGCTC GACAGCTTCG ATCAGGTGAA CGTCGGCGAC
ATCGCCTTCA AGCATGAGAA CGGCGCCTGT TTTCTGGTGC AGGACCTGGC GGCAGAGGCG
CCGCGTGCCG AAAGCTTCGA GATTTCGCCC ACCGGTCCCA TGTTCGGCTG CACCATGATG
GAGTCTCACG GCGCACAGGG CGAACTGGAG CGGGAGGTGC TGGCAGCGCA AGAGCTGACC
CTGGAGAGCT TCAACCTCTC CGGTGGGCTC CGTATGGAAG GGGAGCGGCG TCCCTTGCGG
GTGCCTATCG CCGGGGCGGA GGTGCGGCAG GATGGTTCCG ACCTCTTGCT CGACTTCTCG
CTGCCGCGAG GCGCCTACGC CACCTGCGTG CTGAGCGAGA TAATGAAGAG CGACTGA
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| Protein sequence | MSIYLTAEVP GTGGVIKATP EDFLVEEIPA YLPSGQGEHC FAVLEKRGIA TLEALRRLAK
ALGVQERDLG YAGMKDAIGI TRQTISIPRV APEKVLALEI PGITVLSASM HGNKLRLGHL
KGNRFVIRVR DVAQGAAGNA EAALEIMTRR GVPNRFGVQR YGAQGNTHEI GAAMLRREFK
SAVDRLIGDP AAVTDERWRL AIEAYRRGEV AESLALFPGH FRVERELLTR LVQRPDGFER
AFNSVQPRMK RLYLSAFQSS LFDLVLGKRL DSFDQVNVGD IAFKHENGAC FLVQDLAAEA
PRAESFEISP TGPMFGCTMM ESHGAQGELE REVLAAQELT LESFNLSGGL RMEGERRPLR
VPIAGAEVRQ DGSDLLLDFS LPRGAYATCV LSEIMKSD
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