Gene GM21_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1429 
Symbol 
ID8136757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1680743 
End bp1681663 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID644869041 
Productdiguanylate cyclase 
Protein accessionYP_003021244 
Protein GI253700055 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00000190183 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGTGG TTCACCACGA TGGACTGTTA CAAAAGGTAA TTCACTCGCT GTCAGATCAC 
ATTGCCGTTT TGGACAGTGA AGGATGTATC GTGTTCACGA ACCAGGCCTG GAACCGGTTC
GGTGCCGAAA ATCGCTGCTG CCAGGAATCC GGGTGGGAGG GGGTGAACTA CTTGGAAGCC
TGCGATGAGG CCGCACGAAC AGGTGACGAA TTCGGCAAAC ACGCAGCGAT TGGTATAGCC
AAAGTTATAA GAGGAGAAGA ACGCTTTCAA CTGGAGTACC CCTGCCACAG CCCGAGCGAG
AAAAGGTGGT TCCTTATGAA CGTCGTCGGG TTGGAACACG ACCGCTGCCG ATACGTCGCT
ATATCCCATG TCAACATTAC CTTGCGCAAA CTGGCGGAAG AACATGCCTA CAACCTCTCG
ATGACTGACG GGCTTACCGG CCTCTTCAAT CGCCGCCACT TCGACAATTT CCTGAGCGAT
GAATGGAAGC GGTGTGCCCG CTTGCGGCTT CCCTTGACAG TGGCCATGAT AGACATCGAT
CACTTTAAAT TGCTGAACGA TAGCTACGGG CATCAGTATG GGGACCAATG TCTGATCAAG
GTGGCAGGCG TGCTTAAAGG TTATGCCCGG AGGCCGAGTG ACATATGCGC CAGGTACGGC
GGCGAGGAGT TCGTACTCGT TTTCGGAAAC TGCACCACCG ATATGATGAG GCAGGAGCTG
GACAAGTTGA TGGATGAAAT CCGCGGCCTG CAGTTGCCCA ATGCTAACGC GCCCACAGCC
GGAACGGTTA CTGTAAGCAT AGGGGTGTCG ACTCAGTACC CGCTCCCCCG AACCAAGGAA
AGCATTGCTG TAGGAGAGGC TGACGCCGCT CTTTACAAGG CAAAGCAAGG GGGTAGAAAC
AGGATCGAAT TCTTGAATTG A
 
Protein sequence
MTVVHHDGLL QKVIHSLSDH IAVLDSEGCI VFTNQAWNRF GAENRCCQES GWEGVNYLEA 
CDEAARTGDE FGKHAAIGIA KVIRGEERFQ LEYPCHSPSE KRWFLMNVVG LEHDRCRYVA
ISHVNITLRK LAEEHAYNLS MTDGLTGLFN RRHFDNFLSD EWKRCARLRL PLTVAMIDID
HFKLLNDSYG HQYGDQCLIK VAGVLKGYAR RPSDICARYG GEEFVLVFGN CTTDMMRQEL
DKLMDEIRGL QLPNANAPTA GTVTVSIGVS TQYPLPRTKE SIAVGEADAA LYKAKQGGRN
RIEFLN