Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1429 |
Symbol | |
ID | 8136757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1680743 |
End bp | 1681663 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644869041 |
Product | diguanylate cyclase |
Protein accession | YP_003021244 |
Protein GI | 253700055 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.00000190183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAGTGG TTCACCACGA TGGACTGTTA CAAAAGGTAA TTCACTCGCT GTCAGATCAC ATTGCCGTTT TGGACAGTGA AGGATGTATC GTGTTCACGA ACCAGGCCTG GAACCGGTTC GGTGCCGAAA ATCGCTGCTG CCAGGAATCC GGGTGGGAGG GGGTGAACTA CTTGGAAGCC TGCGATGAGG CCGCACGAAC AGGTGACGAA TTCGGCAAAC ACGCAGCGAT TGGTATAGCC AAAGTTATAA GAGGAGAAGA ACGCTTTCAA CTGGAGTACC CCTGCCACAG CCCGAGCGAG AAAAGGTGGT TCCTTATGAA CGTCGTCGGG TTGGAACACG ACCGCTGCCG ATACGTCGCT ATATCCCATG TCAACATTAC CTTGCGCAAA CTGGCGGAAG AACATGCCTA CAACCTCTCG ATGACTGACG GGCTTACCGG CCTCTTCAAT CGCCGCCACT TCGACAATTT CCTGAGCGAT GAATGGAAGC GGTGTGCCCG CTTGCGGCTT CCCTTGACAG TGGCCATGAT AGACATCGAT CACTTTAAAT TGCTGAACGA TAGCTACGGG CATCAGTATG GGGACCAATG TCTGATCAAG GTGGCAGGCG TGCTTAAAGG TTATGCCCGG AGGCCGAGTG ACATATGCGC CAGGTACGGC GGCGAGGAGT TCGTACTCGT TTTCGGAAAC TGCACCACCG ATATGATGAG GCAGGAGCTG GACAAGTTGA TGGATGAAAT CCGCGGCCTG CAGTTGCCCA ATGCTAACGC GCCCACAGCC GGAACGGTTA CTGTAAGCAT AGGGGTGTCG ACTCAGTACC CGCTCCCCCG AACCAAGGAA AGCATTGCTG TAGGAGAGGC TGACGCCGCT CTTTACAAGG CAAAGCAAGG GGGTAGAAAC AGGATCGAAT TCTTGAATTG A
|
Protein sequence | MTVVHHDGLL QKVIHSLSDH IAVLDSEGCI VFTNQAWNRF GAENRCCQES GWEGVNYLEA CDEAARTGDE FGKHAAIGIA KVIRGEERFQ LEYPCHSPSE KRWFLMNVVG LEHDRCRYVA ISHVNITLRK LAEEHAYNLS MTDGLTGLFN RRHFDNFLSD EWKRCARLRL PLTVAMIDID HFKLLNDSYG HQYGDQCLIK VAGVLKGYAR RPSDICARYG GEEFVLVFGN CTTDMMRQEL DKLMDEIRGL QLPNANAPTA GTVTVSIGVS TQYPLPRTKE SIAVGEADAA LYKAKQGGRN RIEFLN
|
| |