| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1403 |
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| Symbol | |
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| ID | 8136731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1649964 |
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| End bp | 1650929 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644869017 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003021220 |
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| Protein GI | 253700031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.000126451 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAA CGGTGGCCAT CGGCCCACTT GTGTTGAAGA ATCAGCTATT TCTGGCCCCG
ATGGCGGGGA TCACCAATCT GCCGATGCGG ATCGTCTCCC GCGAGGGAGG GGCCTCGTTC
GCCTTCACCG AGATGGTCAG CGTGAACGGC CTGACCCGGG AAGGGCGCAA GAGTTTCGAT
CTGTTGAAAA GCTGCGCCGA GGACCGCCCC ATCGGGATGC AGCTTTTCGG GGACGACCCG
GAGATGCTGG CCGAGGCGGC CCGCCTGGTG GAAGATCACG GCGAGCTGAT CGACATCAAC
ATGGGGTGTC CGGTGCGCAA GGTGGTTGGA ACCGGCGCCG GCAGCGCGCT GATGAAGGAC
CCCCGAAAGG TGGGGCGAAT CGTCAGGAGT GTCAGGGCCG CGACGAGGCT CCCGCTCACC
ATAAAGATAC GGACCGGCTG GGTCTGCGGC GACGACACCT TCCTTGAGGT GGGGAGAATA
GCCCAGGAGG AGGGGTGCGA CGCCGTGACG CTGCATCCCA GAAGCCGCGC CCAGATGTTC
GAGGGGAAGG CCGACTGGTC CCGGATCGCC GAGCTGAAGA GCACGCTCAG CATTCCGGTG
ATCGGCAGCG GCGATCTTTT CAGCGCCGCC GACGTAGCGG GGATGCTGGC CGAAACCGGA
TGCGACGCCG TCATGGTGGC CCGCGGCGCC ATGGGGAACC CCTGGATCTT CCGTGAGGCG
CTCTCGCTTT TGGCCGGGGA GGAGCCTGCT CCGCCCTCGG TGCAGGAGCG GCTGGCGCTC
TCCCGCAGGC ACCTGGAGCT TTTCACCGAG TTCGCGGGAG GGCGGGTGGC GCTCATGGAG
ATGCGCAAGC ACCTCTCCTG GTACTCAAAG GGACTGCCGG GGGCGGCGCA CTTTCGCGCG
GCGGTGAACC GGATCGAAAG TGCTCCGGAG CTGATCCGGG CGATGGAGGA GTTCTTCGAT
GTCTGA
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| Protein sequence | MQKTVAIGPL VLKNQLFLAP MAGITNLPMR IVSREGGASF AFTEMVSVNG LTREGRKSFD
LLKSCAEDRP IGMQLFGDDP EMLAEAARLV EDHGELIDIN MGCPVRKVVG TGAGSALMKD
PRKVGRIVRS VRAATRLPLT IKIRTGWVCG DDTFLEVGRI AQEEGCDAVT LHPRSRAQMF
EGKADWSRIA ELKSTLSIPV IGSGDLFSAA DVAGMLAETG CDAVMVARGA MGNPWIFREA
LSLLAGEEPA PPSVQERLAL SRRHLELFTE FAGGRVALME MRKHLSWYSK GLPGAAHFRA
AVNRIESAPE LIRAMEEFFD V
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