| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1391 |
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| Symbol | |
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| ID | 8136719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1639123 |
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| End bp | 1640694 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644869005 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003021208 |
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| Protein GI | 253700019 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 0.281383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCG GCGTAATACG CAGGTTTTTC CGCTGGATAG GTGGGCTTTC CCCCGCCGCC
ATCAGCGCCA TCTTCGCCTT CAGCAGCCTC TCTTGGCTCC TTCTCGCCCA CCTCCTCTTC
CGTAGTTTTC TCGCCGACCG CGAACTCACC TACCTCGCCC TCAGCATCCT CGAGCTTGTC
GGGGTCGCCA CCATGACCGT CATCGTCTAC CTGCTCAGCG ACAAGAGCGA AGCAAGGCAT
CGCGCCACCG AGCTGAGCAT CCGCGAGCAG GCCATACGAG ACGGACTCAC CGGGCTCTAC
AACCGCCAGG CTTTCGACGA TTTCCTGGCG CAGTCCATCG AATACGCAAA ACGCCGCAGG
GAATCGGTCG CCCTGTTGTT TCTCGACCTC GACCGGTTCA AATTCGTCAA CGACAGGCGC
GGGCACTTCG CGGGAGACGC GGTCCTCATC GAGACGGCGC GACGGCTCAC CGACTGCGCC
AAGCGCGGAG AGGACCTGGT GGCCCGGGTG GGGGGGGACG AGTTCGCCAT GCTGCTGCGC
CACCCCGAAA TGCCTGACGG GCCGGGGGTT GTCGCCAAGC GTGTGCTGGA GGCGTTGTCG
GCGCCGGTGC AGGTGGATGC CGAGACGCTC AAGACCAGCG TCAGCATCGG CATAGCCATG
TTCCCTTCCG ATGCCGACGA TCCCATGCAG CTCTTCAAGA TGGCGGATCT CGCCCTGAAC
CAGGCGAAGC AGCAGGGACG CTCGACCTTC TGCTTCTACG GGGGAGAGTG GCGCGAAGAG
CGCGACCATA CCCTGCAGTT GGAACAGGGG CTCTTGCGGG CCATCAACTA CGGCGAGTTG
TTCCTGGTTT ACCAGCCGAA GCTGGATACT TCGAACATGC GCGTCATAGG GGTGGAGGCG
CTGGTGCGCT GGAACCATCC GCACCTGGGG GTGCTCGGGC CGGCGAGCTT CGTCCCCATC
GCCGAGAAGG CGGGCCTCAT CTGGCCGCTG ACCGAGTGGG TGCTTAAAAG CGCCTGTTCC
CAGGCGGCCA ACTGGTACCG CAACGAGGGG CTGGACCTGA ACGTCGCGGT CAACCTCTCC
CCTTCCGTTT TCTCGCATCA GGACCTGGAA GAGGTGATCG AGAAGGCGCT GAACGACAGC
AAACTTCCCC CGGACCGGCT CACGCTTGAG ATCACCGAGC AGTCGCTGAT GATCTACGAG
ACCGAGGCGC TCGGGGTGCT GGAGCGTCTG CAACGGATGG GAACCAACAT CCAGATCGAC
GACTTCGGCA CCGGCTACTC GTCCCTCTCA TCTCTCAAGC ACTACCACTT CCAGGCGCTC
AAGATCGACA AGTCCTTCGT CAGCGACGTC GTCACCTCTT CGGACGACGC CGCCATCGCC
ACCACCATCA TGTTCATGTC CAAGTGCCTC GACATGGAGG CGATCGCCGA GGGGGTGGAA
TCCGAGGCGC AAAAGGAATT CCTCGCCTCC ATCGACTGCC GCTACATGCA GGGTTTTTAT
TTCTCCAGAC CCCTGGCCGC TTCTGAAATG GCCGCTTTCG TCAGGCGTCT CCCCGACGAC
AAGAAAGCTT GA
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| Protein sequence | MERGVIRRFF RWIGGLSPAA ISAIFAFSSL SWLLLAHLLF RSFLADRELT YLALSILELV
GVATMTVIVY LLSDKSEARH RATELSIREQ AIRDGLTGLY NRQAFDDFLA QSIEYAKRRR
ESVALLFLDL DRFKFVNDRR GHFAGDAVLI ETARRLTDCA KRGEDLVARV GGDEFAMLLR
HPEMPDGPGV VAKRVLEALS APVQVDAETL KTSVSIGIAM FPSDADDPMQ LFKMADLALN
QAKQQGRSTF CFYGGEWREE RDHTLQLEQG LLRAINYGEL FLVYQPKLDT SNMRVIGVEA
LVRWNHPHLG VLGPASFVPI AEKAGLIWPL TEWVLKSACS QAANWYRNEG LDLNVAVNLS
PSVFSHQDLE EVIEKALNDS KLPPDRLTLE ITEQSLMIYE TEALGVLERL QRMGTNIQID
DFGTGYSSLS SLKHYHFQAL KIDKSFVSDV VTSSDDAAIA TTIMFMSKCL DMEAIAEGVE
SEAQKEFLAS IDCRYMQGFY FSRPLAASEM AAFVRRLPDD KKA
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