Gene GM21_1373 details

Gene Information

• Locus tag: GM21_1373
• ID: 8136701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1617999
• End bp: 1619987
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644868987
• Product: SSS sodium solute transporter superfamily
• Protein accession: YP_003021190
• Protein GI: 253700001
• COG category: [R] General function prediction only
• COG ID: [COG4147] Predicted symporter
• TIGRFAM ID: [TIGR00813] transporter, SSS family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 0.00174329
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAAAAA GAATCGCCGC CATAACGCTC GCTCTTACGT TCTCGGTTTG CGCCGCCGCT 
CCCCTCGCAG TCGCAGCCTC GGCAGGAGCT GCCGCCGCGC CGCAGTCGCC GGCGGCGGTA 
GCGCCCGCGG CAACGGCTGC GCCGGCAGCC GCCGACGCGG CTGTGCCCAC CGCGGCAAAG 
GGCGCTTTAG CCAAGGGCGC AGATACCCAG CCGGCCAAGG TGACCCCCAA CCGCGGCATC 
ACCATCGGCA TGTTCGCGCT CATCATTGCC ATCACCATGG GGGTGGTGGT CTGGGCCGCG 
AAGAAAACGC AGACCGCCGC CGACTTCTAC ACCGCGGGCG GTGGGATCAC CGGCCTCCAA 
AACGGCTGGG CCATAGCCGG CGACTACATG TCGGCCGCCT CCTTCCTCGG CATGTCGGGG 
CTCATCTCGC TCTACGGCAT CGACGGCTTC ATGTACGCGG TCGGCCCCAT GTTCTCCTTC 
ATCGCCATCC TCTTGGTCAT CGCCGAACCG TGCCGCAACG CCGGCAAGTA CACGTTGGGA 
GACATCCTCT CCTTCAGGTC GTCGCCCAAG ATCGTGCGGG CCGTAGCTGC CCTTTCCACC 
GTCACCGTCT CCATCTTCTA CCTGATCGCC CAGATGGTCG GCGCCGGAAA GCTGATGCAG 
ATGCTGATCG GGATACCGTA CCGCGTCTCC GTCATCGGGG TCGGGGCGCT TATGGTCGCC 
TACGTCGTCT TCGGCGGCAT GAAGGCCACC ACCTGGGTGC AGATCATAAA GGCTTCGCTG 
TTGATGGGCG CGACGACGCT CCTCTGCATA CTGGTCGCAG CGAAGGCCGG CTTCAACCCG 
GTCTCCTTCT TCACTGACAT CGTGAACAGC CCTGCCATCC AGGATCACGT CAGGCTGAAC 
GTATTGAAGG ACGCGATTCC CAAGGCGGGG ATGGATTACG GCCAGCGCTT CATGGAGCCC 
GGACTCTTCC TGAAAAGCCC ACTGGACCAG ATCTCGCTGG GTATCGCCTG GGCGCTCGGC 
GCCGCCGGGC TGCCGCACAT CCTGATGCGC TTTTTCACGG TCCCCAGCGC CAAGGAGGCG 
CGCAAGTCGA TCATCATCGC CCTTTTCCTG AACTCCAGCT TCTTCTTCAT GATCAGCATC 
ATCGGTTTCG GAGCCGCGCT TTACCTGACC CCGCAGGGGA TCATGGCAGT GGACAAGGGT 
GGCAACATGG CGACGCTGCT TCTGGCGCAG CACATGGGTG GCGGCGCCGG CAGCCTCGGC 
GGAGACGTCT TCCTTGCCTT CATCTGCGCC GTAGCCTTCG CCACCATCCT CGCCGTCGTC 
TCGGGGCTCG TGCTCGCGGC CTCCGCGGCA ATAGCCCACG ACGTCTACGT GAACATCATC 
AAGGACGGCA AGGCCGACCA GCACCTGCAG GTGAAGGTGG CCCGCATCAC CTCCCTGTTC 
GTCGGCACCT CCGCCATCCT GATGGGCCTT GCGGCCGAGA AGGAGAACGT GGTCGCCCTG 
GTGGCGCTGG CCTTCGCGGT CGCCGCTTCG GGGAACTTCC CGGTGATCAT GCTCTCCTTG 
TTCTGGAAGA AGTTCAACAC CGCGGGGATC GTCTCCGGCC TCGTGGTCGG GACCGTCACC 
GCCCTCGCGC TGGTGGTGGT GTCGCCGGTG ATGACCTACC CCAAGAAGGT CGCGGCCGAC 
GCCAAGAAGA TCGTCGACAC CCTGGAGCTG AAACAGGCAT CCGGCGTGGC GCTGGCGGAC 
AAGGAGCTGA AGACCCTGGA GAAGTCGCGC GTGGAATATG AGAAGAACAA GAACGGCAGC 
TCCATGGTGG GGCTCGACAA GCCGATATTC CCGCTGAAGA ACCCGGGGAT CGTCTCGGTG 
CCGCTTGGAT TCCTCGCCGC CGTTTTCGGC TGCCTCCTGT TCCGCGACCG CCGCGCAGAG 
GATATGTTCT CCGAGATCGA CGTGCGGCAG AATACCGGCC TCGGGATAGC CAAGGCCACC 
GATCATTAG 

 

Protein sequence

MKKRIAAITL ALTFSVCAAA PLAVAASAGA AAAPQSPAAV APAATAAPAA ADAAVPTAAK 
GALAKGADTQ PAKVTPNRGI TIGMFALIIA ITMGVVVWAA KKTQTAADFY TAGGGITGLQ 
NGWAIAGDYM SAASFLGMSG LISLYGIDGF MYAVGPMFSF IAILLVIAEP CRNAGKYTLG 
DILSFRSSPK IVRAVAALST VTVSIFYLIA QMVGAGKLMQ MLIGIPYRVS VIGVGALMVA 
YVVFGGMKAT TWVQIIKASL LMGATTLLCI LVAAKAGFNP VSFFTDIVNS PAIQDHVRLN 
VLKDAIPKAG MDYGQRFMEP GLFLKSPLDQ ISLGIAWALG AAGLPHILMR FFTVPSAKEA 
RKSIIIALFL NSSFFFMISI IGFGAALYLT PQGIMAVDKG GNMATLLLAQ HMGGGAGSLG 
GDVFLAFICA VAFATILAVV SGLVLAASAA IAHDVYVNII KDGKADQHLQ VKVARITSLF 
VGTSAILMGL AAEKENVVAL VALAFAVAAS GNFPVIMLSL FWKKFNTAGI VSGLVVGTVT 
ALALVVVSPV MTYPKKVAAD AKKIVDTLEL KQASGVALAD KELKTLEKSR VEYEKNKNGS 
SMVGLDKPIF PLKNPGIVSV PLGFLAAVFG CLLFRDRRAE DMFSEIDVRQ NTGLGIAKAT 
DH