Gene GM21_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1336 
Symbol 
ID8136663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1570192 
End bp1570941 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID644868950 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003021154 
Protein GI253699965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00000822091 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAAG AAGAAATCAT CTACGGCCTG AACCCGGTAA TGGAAGCGCT GCGCGGCTCG 
CGCGAGATAC ACGAGCTTTT CGTAGCCGGA ACCAGTTCAG ACAAGCGTCT GGAAAAGCTG
CTGAAGCTCG CCGCCGACAG AAAGATTCCT GTCCGCCAGC GCGAGAAGGG CGACCTGAAC
CGTCTGTGCG GCACCGAGCA CCACCAAGGC GTGGCGCTCA AGGTAGAGCC GTTCCCGTAT
GCTGATCTGG ACGACGTGCT GGCAGAGCTG AAAGGAAACC AGGAGGGATT GGTTCTGGTG
CTCGACAGCG TGCAAGATCC GCACAACCTC GGCGCCCTTA TCCGGAGCGC CGCCTGCGCC
GGAGCCCATG CCGTGGTCAT CCCCAAAGAC CGTGCGGCAG GAGTCACGGC AGTAGCTGAG
AAGTCTTCAG CCGGCGCCAC CGAGACCATT TCCGTCGCCC AGGTGACCAA CATCTCCCAA
GCGCTGGAGA GTCTGAAGAA GGCGGGCTTC TGGATCTACG GCGCCGACGG TTCCGCGAGA
TCTACGCTGT ACCAGCAGGA TTTCTCCGGT CCGGTAGCGC TGGTGATCGG CGGGGAAGGA
GAGGGGATTC GGCCTTTGGT CAGAAAAGGG TGCGACGCAG TCGTCAGCAT TCCGCTGCAG
GGCGGCGTCA ACTCTCTCAA CGCCTCAGTC GCCGGAGGCA TCATGTTATT CGAAGTCGTG
CGCCAGAGGA TGAGCAGGAA AAAAGCGTAA
 
Protein sequence
MSKEEIIYGL NPVMEALRGS REIHELFVAG TSSDKRLEKL LKLAADRKIP VRQREKGDLN 
RLCGTEHHQG VALKVEPFPY ADLDDVLAEL KGNQEGLVLV LDSVQDPHNL GALIRSAACA
GAHAVVIPKD RAAGVTAVAE KSSAGATETI SVAQVTNISQ ALESLKKAGF WIYGADGSAR
STLYQQDFSG PVALVIGGEG EGIRPLVRKG CDAVVSIPLQ GGVNSLNASV AGGIMLFEVV
RQRMSRKKA