| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1335 |
|---|
| Symbol | |
|---|
| ID | 8136662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1569297 |
|---|
| End bp | 1570019 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644868949 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_003021153 |
|---|
| Protein GI | 253699964 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.00000805853 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAG AAGAAGCAAT CAAGAAGATA ATCTTCGCCA TGGATGTGAA GGAGTTCAGC
GACGTACAGT ACTGGGCCGA GCTTCTCTCG CAGCATGTCG GCATGTTCAA GGTCGGCAAG
CAGCTCTACA CCGCCTGCGG CCCCGCCGCG GTCCGCATGA TCCAGAAGTG CGGCGGCGAG
GTGTTCCTCG ACCTCAAGTA TCACGACATC CCGAACACCG TCGCCATGGC GACCCTCGAG
GCCGCGAACC TCGGCGTGCA GCTCTGCGAC CTGCATGCCA TGGGCGGCTA CGAGATGATG
AACAAGACCA TGGAGGCCCT CGACAAGAAC TTCAGCGGCT GCACCCCGCG TCCCAAGGTT
CTTGCCATCA CCGTCCTCAC CTCCTCCAAC GAAGAGACCC TGCGTGGTAT TGGGATCGAA
CTCCCGGTCC CCGAGATGGT CGTCAAGCTC GCCAAGCTTG CGAAGAGCGC AGGCGTCGAC
GGCGTCGTCG CCTCCCCGCA GGAAGTGGAG CTGATCAGGG AAGCCTGCGG CAAGGACTTC
CTCGTCGTCA CCCCCGGTGT CCGTCCGAGC TTCGCCTCCG CCGACGACCA GAAGCGGATC
ATGACCCCCG CCGAAGCCGT CAAGGCCGGC GCCGACTACC TGGTCATAGG CCGCCCCATC
GCCGCCGCCC AGAGCCCGGT AGAGGCCGCA CAGAAGATCG TCGACGAAAT CGTAGCCGGC
TAA
|
|---|
| Protein sequence | MTREEAIKKI IFAMDVKEFS DVQYWAELLS QHVGMFKVGK QLYTACGPAA VRMIQKCGGE
VFLDLKYHDI PNTVAMATLE AANLGVQLCD LHAMGGYEMM NKTMEALDKN FSGCTPRPKV
LAITVLTSSN EETLRGIGIE LPVPEMVVKL AKLAKSAGVD GVVASPQEVE LIREACGKDF
LVVTPGVRPS FASADDQKRI MTPAEAVKAG ADYLVIGRPI AAAQSPVEAA QKIVDEIVAG
|
|---|
| |