| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1333 |
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| Symbol | ispG |
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| ID | 8136660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1566033 |
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| End bp | 1567088 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644868947 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003021151 |
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| Protein GI | 253699962 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.00000208857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA CGACCCGGCA GATCATGATA GGGAATATCC CCATCGGCGG AGGAGCTCCC
TGCTCCGTCC AGTCCATGTG CTCGACCGAC ACCCGTGATG TCGCCGCGAC CCTTGGGCAG
ATCGGCCGGC TTGCCGCCGC CGGATGCGAG ATCGTGCGCT GCGCAGTACC CGATATGGAC
GCCGCCCTGG CCCTTGCCGC CATAAAATCC GGCTCCCCCA TGCCGCTCAT AGCTGATATC
CACTTCGACT ACAAGCTCGC CTTGAAGGCC CTGGAGTCCG GTGTTGGCGG GCTTCGTCTC
AATCCCGGCA ACATAGGCGA AAAGTGGAAG GTCGCCGAGG TGGTGAAAGC CGCGGCCGAG
CGCAACGTTC CCATCCGCAT CGGCGTCAAC GGCGGTTCGC TGGAAAAGGA ACTGCTGGTG
AAGTACGGGC ACCCGACTCC CGAGGCCATG GTCGAGTCGG CGCTGGGGCA CGTGCGGATC
CTGGAGGAGC TGGGCTATCA GCAGATAAAG ATATCGATCA AGGTCTCCGA CGTGTTGCGG
ACCCTGGAAG CGTACCGGCT CCTTTCCGAC GCCGTGGACT ACCCGCTGCA CATAGGCGTA
ACCGAAGCCG GAACCATCTT CGCCGGAACC GTCAAGTCCT CCGTTGGTCT CGGGATCCTT
CTGCACCAGG GGATCGGCGA CACCATGCGC GTCTCCCTCA CCGGCGACCC GGTTGACGAG
GTGCGGGTGG CGTACGACAT CCTCAAATCG CTCGGTTTGC GGACGCGCGG CATCAACTTC
GTCTCCTGCC CCACCTGCGG GCGCTGCCAG GTAAACCTGA TACCCGTAGC CGAGGAAGTA
GAGCGGCGCC TGGCGCATCT GGATACGACG ATCACCGTTG CCGTCATGGG ATGTTCCGTC
AACGGTCCAG GCGAGGCCCG CGAGGCGGAC TTCGGCATAG CCGGGGGTAG GGGAGAAGGG
CTTCTCTTCA GGCACGGCGA GATCCTGCGC AAGGTCCCCG AAGCCGAGCT AGCCGACGCC
CTGGTGGAAG AAGTTTTGAA GAACAGTCAG ACCTGA
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| Protein sequence | MKKTTRQIMI GNIPIGGGAP CSVQSMCSTD TRDVAATLGQ IGRLAAAGCE IVRCAVPDMD
AALALAAIKS GSPMPLIADI HFDYKLALKA LESGVGGLRL NPGNIGEKWK VAEVVKAAAE
RNVPIRIGVN GGSLEKELLV KYGHPTPEAM VESALGHVRI LEELGYQQIK ISIKVSDVLR
TLEAYRLLSD AVDYPLHIGV TEAGTIFAGT VKSSVGLGIL LHQGIGDTMR VSLTGDPVDE
VRVAYDILKS LGLRTRGINF VSCPTCGRCQ VNLIPVAEEV ERRLAHLDTT ITVAVMGCSV
NGPGEAREAD FGIAGGRGEG LLFRHGEILR KVPEAELADA LVEEVLKNSQ T
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