| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1324 |
|---|
| Symbol | |
|---|
| ID | 8136651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1554949 |
|---|
| End bp | 1557180 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644868938 |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_003021142 |
|---|
| Protein GI | 253699953 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00000000000000574496 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAG AAAAAGCAAA GATCGTTTGG ACCAAGATCG ACGAGGCCCC CGCACTGGCA
ACCTACTCCC TGCTCCCCAT CGTCAACGCC TTCACCAAGG CCGCCGGCGT TGTCGTCGAA
ACCAGGGACA TCTCGCTGGC AGGCAGGATC CTCGCCAACT TCCCGGATTA CCTGACCGAG
AGCCAGAAGA TCCCGGACGA GCTGGCGTAC CTGGGTGATC TGACCCAGAA GCCGGAAGCG
AACATCATCA AGCTTCCTAA CGTCTCCGCC TCCATCCCGC AGCTGAAAGC CGCCATCGCT
GAGCTCCAGA GCCAGGGGTA CAAGCTCCCG GAATACCCGG AAGAGCCGAA GACCGACGAG
GAGAAGGCGC TGAACGCTCG CTACGCGAAG GTGCTCGGTT CCGCCGTCAA CCCGGTCCTC
AGGGAAGGCA ACTCCGACCG CCGCGTCGCC AAGGCAGTCA AGGAATACGC CAAGAAGCAC
CCGCACAAGA TGGGCGCCTG GTCCTCCGAC TCCAAGAGCC ACGTCTCCAA CATGAGCGCC
GGCGACTTCT ACCACAGCGA GAAGTCGGTG ACCCTGAAAG ACGCCACCAC CGCAAGGATC
GAGTTCGTCG ACAACTTCGG CAACGTCACC GTGATGAAGG ACAAGCTCCC GCTGCAGGCA
GGCGAGGTGC TGGACGGCTC CTTCATGAAC GTGCGCGCCC TGAGGAAGTT CATCCAGGAG
CAGATCGACG ACGCTAAAGC CAAGGGCGTC CTCTTCTCCG TGCACCTCAA GGCCACCATG
ATGAAGATCT CCGACCCGGT CATCTTCGGC CACTTCGTCT CCGTCTTCTT CAAGGACGTC
TTCGAGAAGC ACGCGGCCAC CTTCAAGGAA ATCGGCGTCA ACGCTGACCT GGGCCTTGGC
GACCTCTACA AGAAGCTCGA GAAGGTTCCG GCAGGGAAGA AGGCAGAGAT CGAGGCCGAC
ATCCAGGCCA CCTACGCGAA GCAGCCGCCG CTGGCGATGG TCGACTCCGA CAAAGGGATC
ACCAACCTGC ACGCGTCCAA CGACATCATC ATCGACGCCT CCATGCCGGT CGTCGTCCGC
GACTCCGGCA AGATGTGGGG CCCGGACGGC AAACTCGCCG ACACCAAGTG CGTGATCCCC
GATACCTGCT ACTCCGAGTG GTACCAGGAG TGCATCGACT TCTGCAAGAA AAACGGCCAG
TTCGACCCGA CCACCATGGG TGCTACCTCC AACGTCGGCC TCATGGCTCA GAAGGCTGAG
GAGTACGGCT CCCACGACAA GACCTTCAAG GCTCCGCTGA ACGGCACCAT GCGCGTAGTC
GACGCTGCCG GCGAAGTGCT GATCCAGCAC CAGGTAGAAG AGGGCGACAT CTGGCGCGGC
TGCCAGGCGA AGGATCTCCC GATCCGCGAC TGGGTCAAGC TTGCCGTCAA CCGTGCCCGC
GCCACCGGCG CTCCGGCCGT CTTCTGGCTC GACAAGAACA GGGCTCACGA CGCCCAGATG
ATCCTGAAGG TGAACACCTA CCTGAAGGAC CACGACACCA AAGGGCTCGA ACTGCACATC
ATGTCCCCGG TCGAGGCGAT GAAGTTCACC CTCCCCAGGG CCAAGGCGGG CCTCGACACC
ATCACCGTGA CCGGCAACGC GCTCAGGGAT TACCTGACCG ACCTCTTCCC GATCCTCGAA
CTCGGCACCT CCGCGAAGAT GCTCTCCATC GTTCCGCTTC TGGCGGGCGG CGGCCTCTTC
GAAACCGGTG CGGGCGGTTC CGCTCCGAAG CACGTGCAGC AGTTCCAGCA GGAAGGCTAC
CTCCGTTGGG ACTCCCTGGG CGAGTTCCTG GCCCTGGCCG TCTCGCTGGA GCACCTGGCG
GCTACCTTCA AAAACGAGAA GGCGGCGCTT CTCGCCGAGA CCCTCGACAC GGCCAACACC
AAGTTCCTGG ATCAGAACAA GAACCCGGCG CGTAAGGTAG GCCAGATCGA CAACCGCGGC
AGCCACTTCT ACCTCGCCAT GTACTGGGCC GAGGCGCTCG CCGCCCAGAC CAAGGACGCC
GAGCTCGCAA CCCGCTTCGC CAAGGTCGCC AAGGAGCTTC AGGACAACGA AGAGAAGATC
AACGCCGAGC TGATCGGCGC GCAGGGCAAG CCGGTCGACA TGGGCGGTTA CTACCACCCG
AACGATGCCA AGACCGAAGC TGCGATGCGC CCGAGCGCAA CCTTGAACGC CATCGTCAAC
TCGATCGTAT AA
|
|---|
| Protein sequence | MTTEKAKIVW TKIDEAPALA TYSLLPIVNA FTKAAGVVVE TRDISLAGRI LANFPDYLTE
SQKIPDELAY LGDLTQKPEA NIIKLPNVSA SIPQLKAAIA ELQSQGYKLP EYPEEPKTDE
EKALNARYAK VLGSAVNPVL REGNSDRRVA KAVKEYAKKH PHKMGAWSSD SKSHVSNMSA
GDFYHSEKSV TLKDATTARI EFVDNFGNVT VMKDKLPLQA GEVLDGSFMN VRALRKFIQE
QIDDAKAKGV LFSVHLKATM MKISDPVIFG HFVSVFFKDV FEKHAATFKE IGVNADLGLG
DLYKKLEKVP AGKKAEIEAD IQATYAKQPP LAMVDSDKGI TNLHASNDII IDASMPVVVR
DSGKMWGPDG KLADTKCVIP DTCYSEWYQE CIDFCKKNGQ FDPTTMGATS NVGLMAQKAE
EYGSHDKTFK APLNGTMRVV DAAGEVLIQH QVEEGDIWRG CQAKDLPIRD WVKLAVNRAR
ATGAPAVFWL DKNRAHDAQM ILKVNTYLKD HDTKGLELHI MSPVEAMKFT LPRAKAGLDT
ITVTGNALRD YLTDLFPILE LGTSAKMLSI VPLLAGGGLF ETGAGGSAPK HVQQFQQEGY
LRWDSLGEFL ALAVSLEHLA ATFKNEKAAL LAETLDTANT KFLDQNKNPA RKVGQIDNRG
SHFYLAMYWA EALAAQTKDA ELATRFAKVA KELQDNEEKI NAELIGAQGK PVDMGGYYHP
NDAKTEAAMR PSATLNAIVN SIV
|
|---|
| |