Gene GM21_1323 details

Gene Information

• Locus tag: GM21_1323
• ID: 8136650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1553853
• End bp: 1554545
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644868937
• Product: Peptidoglycan-binding LysM
• Protein accession: YP_003021141
• Protein GI: 253699952
• COG category: [S] Function unknown
• COG ID: [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 7.6395e-23
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

TTGAAGCTCG CCGCACGGTT CATAACCCTT TTGCTCGTCA TTTCAGCGGC GGCCTGCGCA 
ACGCAGCCGC CGCGTTTTCG CGTCGAGGCG AGCGCGAGGC TCGAGCAGCT GAGGCTCGAA 
GGGGGCGAGC GGCTCCACCC GAACGAGTAC GCCGGCACGC TGCAGGCCTT TTTCAAAGGG 
GACGCGCTGC TTCAGGCCAA CGAGCGCGAG GAGGCGGATC GCTACTTCGA GCTGGCGCTG 
TTGAAAGCCG AGCTGCTTGA AAAGACCCTC AACGAGGAAA AGGCGCGGGA GCAGGCCGCG 
CGCGAGCGGG CCGAAGAGGA AAAACGGCGC GCCGAACGCG AGAAAAAGGC GCGGGAGGAA 
GCGGAGCGGA GGGCGCAGGC GAAGGCCGCC GCCGAAGAGA GGGCGAAGCG GGAGGCGGCC 
GAGGCCGAGC ACAGGAAACC TAAGCCCCAG AAAGAGCCGC AGCTCGTCGC CTCCTACACG 
GTGAGAAGGG GCGAATCCCT CCCCCTGATA GCCTCGCGCC CCGAGGTGTA CGGCGACCGC 
TTCCTCTGGC CGCTTCTCTA CCGCGCCAAC CGGGACCAGA TCCGGGACCC CAGGCACATC 
TGGCCCGGCC AGGTGCTGCG CATCCCCCGC AACCAGGGGC GCGACGACAT CTCCGAGGCC 
AGGCGCTACG CCCAGGAGCG CCCGCTGCAC TGA 

 

Protein sequence

MKLAARFITL LLVISAAACA TQPPRFRVEA SARLEQLRLE GGERLHPNEY AGTLQAFFKG 
DALLQANERE EADRYFELAL LKAELLEKTL NEEKAREQAA RERAEEEKRR AEREKKAREE 
AERRAQAKAA AEERAKREAA EAEHRKPKPQ KEPQLVASYT VRRGESLPLI ASRPEVYGDR 
FLWPLLYRAN RDQIRDPRHI WPGQVLRIPR NQGRDDISEA RRYAQERPLH