Gene GM21_1309 details

Gene Information

• Locus tag: GM21_1309
• ID: 8136636
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1537488
• End bp: 1539395
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644868923
• Product: arginine decarboxylase
• Protein accession: YP_003021127
• Protein GI: 253699938
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.0000000000000212107
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCCAAAT GGACTATCAA CGATTCCTCG AAGATCTACA ACATCGACAA CTGGGGCGCG 
GAACTCTTCT CCATCAACAA GAAGGGAAAC GTCTGCGTGC ACCCTTCGCC CAATTCCAAA 
TACTCCATCG ATCTAAAGGT GCTGGTTGAC GACTTGATCA AGAGGAAGAT CAAGCCCCCG 
ATCCTCCTGC GCTTCATGAA CATACTGGAA GGGCGTATCG CCTCCATCAG CCGGGTGTTT 
AAAAACGCCA TCAGCGACAA CAACTACCCG GCCAAGTACC AGACCTTCTA CCCCATCAAG 
GTGAACCAGC AGCGCCAGGT GGTGGAGGCG ATCGCGAACT TCGGCAAGAA GTACAACATC 
GGCCTCGAGG TCGGCTCCAA GCCGGAACTG GTGGCGGCGA TCTCCATGTC GACCGGGAAC 
AACCTTCCCA TCCTCTGCAA CGGCTACAAG GACACCGAGT TCATCGAGAC GGTGCTCTTC 
GCGACCCGGG TCGGCTACGA CATCACCATC GTCGTGGAGA AACTCTTCGA GCTGGAGAAG 
ATCGTCGAGG TCTCCAAGCG CACCGGGATC GTGCCGAAGC TCGGCATCAG GGTGAAGCTC 
TCCTCCAAGG GTATCGGCAA GTGGTCCACC TCCGGCGGCG ACGACGCGAA GTTCGGCCTG 
CGCATCTCGG AGCTCATCGC CGCCATCGAG ATGCTCAAGC AAAACGACAT GCTCGACAGC 
GTGAAGCTCT TGCACTTCCA CGTGGGGAGC CAGATCACCA AGATCGACAA GATCAAGAAC 
GCCCTCATCG AGGGGACCAG GATCTACGCC GAGATGAGAA AGCTCGGGGT GAACCTGGAG 
TTCCTCGATA TCGGCGGAGG GCTTGGCGTC GACTACGACG GCTCCAAGTC GAGCTACTTC 
TCCAGCGTGA ACTACTCGCT CGAGGAGTAC GCCAACGACG TCATCTACCA GGTGAAGAAC 
ATCTGCGACG ACGCCGGGGT TCCCTGCCCG AACATCATCT CCGAGTCCGG GCGCGCCACC 
GTCGCCCACT ACTCGGTCCT GGTTACGGAC GTCCTGAACA ACAACACCCA GACGCTGATG 
CCGGACTTCG AGTCGATCCT GACCGAGTCG GAGAAGCTCT CGCCGACCGT TAAAAAGCTG 
GTCGACATCT ACAAGAGCAT CGACAAGCAC TCCTTGCGCG AGGATTACCA CGACACCATC 
CAGCTGATCC AGGAGTCGGT GAGCCTGTTC AACCTGGGCT ACCTGAACAT GGCCGAGCGT 
GCCAACGCGG AATGGATCTG CTCCAAGATC ATCAGGAAGA TCAACTCGAT CGTGGAAAAG 
ATGAAGCCGA TTCCGGACGA GCTGCAGAAC TTCCAGCTGA GCCTGAGGCA GACCTATTTC 
GCCAACTTCT CGCTCTTCCA GTCCATCCCG GACTCCTGGG CCATCGACCA GCTCTTCCCG 
ATCGTCCCGA TCCAGCGGCT GGACGAGAAG CCGGACGTTT TGACCTCCAT CGCCGACATC 
ACCTGCGATT CCGACGGCGA GATCACCAGC TTCGTCGGCG AGAACGGCAG GACCAAGGCG 
TTGCCGCTGC ACAAGATCAA GGTGGACGAG CAGTACTACA TCGGCTTCTT CCTGATCGGC 
GCCTACCAGG AGATCCTGGG CGACATGCAC AACCTCTTCG GCGACACCAA CGCGGTGCAT 
ATCACCTTCA ACAAGAAGAC CAACTACAAG ATCGACACGG TCATAACCGG CGACGCTACC 
TGGGAAAGTC TCAAGTACGT GCAGTACGAC AGCCAGGAGA TCCTCAAGAG GGTGCGCAAC 
AACCTGGAGA AGGACGTCTC GCTGCAGAAG GTCTCCATCG AGGAGAGCAG CCATTTCCTC 
GAACTGTTGG ATAAGACGCT GCAGTCATAC ACATATCTGG GGGAGTAG 

 

Protein sequence

MAKWTINDSS KIYNIDNWGA ELFSINKKGN VCVHPSPNSK YSIDLKVLVD DLIKRKIKPP 
ILLRFMNILE GRIASISRVF KNAISDNNYP AKYQTFYPIK VNQQRQVVEA IANFGKKYNI 
GLEVGSKPEL VAAISMSTGN NLPILCNGYK DTEFIETVLF ATRVGYDITI VVEKLFELEK 
IVEVSKRTGI VPKLGIRVKL SSKGIGKWST SGGDDAKFGL RISELIAAIE MLKQNDMLDS 
VKLLHFHVGS QITKIDKIKN ALIEGTRIYA EMRKLGVNLE FLDIGGGLGV DYDGSKSSYF 
SSVNYSLEEY ANDVIYQVKN ICDDAGVPCP NIISESGRAT VAHYSVLVTD VLNNNTQTLM 
PDFESILTES EKLSPTVKKL VDIYKSIDKH SLREDYHDTI QLIQESVSLF NLGYLNMAER 
ANAEWICSKI IRKINSIVEK MKPIPDELQN FQLSLRQTYF ANFSLFQSIP DSWAIDQLFP 
IVPIQRLDEK PDVLTSIADI TCDSDGEITS FVGENGRTKA LPLHKIKVDE QYYIGFFLIG 
AYQEILGDMH NLFGDTNAVH ITFNKKTNYK IDTVITGDAT WESLKYVQYD SQEILKRVRN 
NLEKDVSLQK VSIEESSHFL ELLDKTLQSY TYLGE