| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1293 |
|---|
| Symbol | |
|---|
| ID | 8136620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1514554 |
|---|
| End bp | 1515852 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868907 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003021111 |
|---|
| Protein GI | 253699922 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1.32079e-19 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT TGATCCAGAG GTTCATCCCG CACCATCCCG GTACCTATTC CCTCATGCTC
GCCCTTTGCT GGACCGCGGT GATGGCGCTG TCCCTGGCGG GAAGCCTGTC GAGCCTGCGG
CGGGAGATCA ATACCATCGC GGGGAACATC GCCGGCGCCT ATATCGACAA GGACGTCCTC
TACCGTAACT GGAACGCGCT CCATGGCGGG ATCTACGTCC CGGTGAACCA GGGGCTGGCG
CCGAACGCCT TCTATCCCCC CTCAATGCCG GAGCGGGATG TGATGACCCC GTCGGGGCGG
CACCTAACCT TCGTCAACCC GTCCTACATG ATGCGGCAGA TCTATGATCT TTCCCGCAAA
GAGGAGGGCA TCACCGCGCA CATCACGAGC TTGAAGCCGC TCAACCCGAA GAACGCTCCG
TCTACTTGGG AAGCGGAGGG GTTGCGCGCA TTCGAGCGGG GCGACCGCGA GGCACGCAGC
GTCGTCTCCG AGGGGGGGAA GCGCTATGTG CGTCTCATGC GTCCCCTGGT GACGGAAGAA
AGCTGCCTCG CCTGTCATGC GCAGCAGGGG TACAAAAAAG GGGACATCCG GGGCGGCATC
AGCATCAGGA TGCCGATGGG ACTCCTGGAG GCGGGACTCG GCAAGCAGTT GAAGAACCTT
GCGCTGGCCC ATGCGGCGGT CTGGCTCCTG GGGCTTCTCG GGCTCTTCGC CGGCTCCCTC
GGGCTGCGGC GCCGTACCGC GGAGCGCGAC CTCGCCCTGC AGGAGCTGAA GCAGGCCAAT
GCCCTGCTGG AGAGCCAGGC GACCACCGAT CCGGTGACCG GGATCTTGAA CCGCCGCAAG
TTCTGCGAGC TTTTGGAGAG CGCCATCCAG GAATCCAAAC GCTACGGGTT GCCGCTGGCG
ATCATCTTCC TCGACGTGGA CCGCTTCAAG CCGATCAACG ACACCTACGG TCACGACGCA
GGCGACAGCG TGCTTAGGGA ACTGGCGGGG CTCGTCTCGG GGATGATCCG CAAGACCGAC
ATCTTCGCCC GCTTCGGAGG GGAGGAATTC GTGCTGGTGG TGCACAACAA CGACGGCAGG
ACTGCGCGCA TGCTCGCCGA GAAGATCCGG AGCCGGGTGA GCCAACACAG CTTCATCCAT
GTGGGGCAGG TGACAGCCAG CTTCGGGGTG GCGAGGCTTG AGCCGGGCGA CACCCCCGAG
AGCCTGGTGA AGAGGGCCGA CCAGGCGATG TACAGCGCGA AGCACGCCGG CAGAAACCGG
GTCGAGACCT GCTGCGATTG CCACAGCGTC GCCGCATGA
|
|---|
| Protein sequence | MNKLIQRFIP HHPGTYSLML ALCWTAVMAL SLAGSLSSLR REINTIAGNI AGAYIDKDVL
YRNWNALHGG IYVPVNQGLA PNAFYPPSMP ERDVMTPSGR HLTFVNPSYM MRQIYDLSRK
EEGITAHITS LKPLNPKNAP STWEAEGLRA FERGDREARS VVSEGGKRYV RLMRPLVTEE
SCLACHAQQG YKKGDIRGGI SIRMPMGLLE AGLGKQLKNL ALAHAAVWLL GLLGLFAGSL
GLRRRTAERD LALQELKQAN ALLESQATTD PVTGILNRRK FCELLESAIQ ESKRYGLPLA
IIFLDVDRFK PINDTYGHDA GDSVLRELAG LVSGMIRKTD IFARFGGEEF VLVVHNNDGR
TARMLAEKIR SRVSQHSFIH VGQVTASFGV ARLEPGDTPE SLVKRADQAM YSAKHAGRNR
VETCCDCHSV AA
|
|---|
| |