Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1263 |
Symbol | |
ID | 8136589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1471010 |
End bp | 1473619 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644868876 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003021081 |
Protein GI | 253699892 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3614] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 122 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCA CCCCGCCACC AGTTGACAAC CCACCCTCCA CAAGCCTTTG GGCAAAAACC ATTCATATTT TGCCGTACCT CGTCATGGCC CTTTCCTTTC TTATGACTTT CTTCTTCTGG CGCCAGTACG ACAACAGCCT GAACGTGCGG TCGCAGGTAG TATTTAACGA TCGTGCCGAT GAGGTAATGG ATCGGTTCTT CACCAGGATG ACGGATGACG AACAGATCCT GAGGGGGGCG GCGGGGCTAT GCAACGCCAG CAAGGACGTA AAGCGCGACG AGTGGCGGCG CTACGCGCTG TCGCTTTCTC TGGATAAGAA CTTCCCCGGC TTCCAGGGTT TGGGCCTAAC CGAGGTGGTC CGTCCCCGGG ACTTGCAGCG TCATATCCAG CGGATAAGGG GAGAAGGGTT CCCTAATTAC AGATTGTGGC CGGAAGGGGA GCGGCAGGAG TACACCGCCA TCATCTACCT GGAACCCTTT GACTGGCGCA ACCAGCGTGC CTTCGGCTAC GACATGTTCT CCGAACCCAT CCGGCACGAG GCCATGGCGA AGGCCCGCGA CCTTGGAGAA GCAGTGACAA CCGGTCCGGT GACGCTGGTG CAGGAAACGA AAACGGACAA GCAGACCGGG GTTTTGATGT ACATCCCTGT GTACGAACTG GGCCTCCCCC TAGAGACGGT GGCGCAGCGA CGCGTCGCGG TGAAAGGATA TGTCTACAGC CCGATCAGGA TCAAGGACTT CCTTTCCGCG ACCTTCCCCA GAGTTCCGAA AGACATAGGC TTCAGGATCT ATACGGACAA GGAGCCGAAC CCCGCCGGGC TTATCTATGA CTCCGTCTCC GACTCCAACC TCAACCTTCC GGACAGCTAC CGGGGCGAAC TGCAGACGAC CCGATCGTTT CAGAGATTCG GCCGCAACTG GTTATTCACC TTCGAGTCGC TGCCTCAATT TGCGCAAGAG CAAAGGAAAA GCCAGTCCAG AAACTACCTG ATCGTCGGGA TTACCGTCAG CATCCTGTTG TCGGTAATCG CATTCATGCT CCGTTCCGCA CATGCCGGCG CCATCGCCGC AGCGCAGGCA CTGAAGGAAA GCCGGGAGCG TTACCGCAAG ATCTCGGAAG ACAGCCCCGC ATATATCACC ACCTTACTTC CCGATGGCAC GCTCACCTAC GTGAACCCCG CCTTGGCCCA CGACCTGGGC AAGCGCCGGG AAGATCTTTT AGGCAAAAAC TTTTTCGAGT TTCTCCTGCC CGAGTACCGG GAACCGGTCC GGCAGGGGTT GCACTCCCTT TCGCCTCAAA ACCCGACTTA CACCGTGGAA CAGGCGCTGG TCGGCCCGAA TGAGGCAGTA ATCTGGCATG AATGGACCAA TCGGGCGTTG TTCGACGATC ACGGGGGCAT AGCCGAGTTT CAGGGCGTTG GGCAGAACAT TACGGAGAGG AAGAACGCCG CGGAAGAACG CTCCCGGCTG GAGCAGCAGA TGCTGCATGC CCAAAAAATG GAAAGCCTGG GGGTGTTGGC CGGCGGCGTG GCGCATGATT TCAACAACAT CCTGATGGCC ATCATAGGGA ACGTGGACCT GTCGCTGATG AAGATCGAGG AGGCCTCCCC AATCACGGCG AATCTGCGCA ACATCGAGAA AGCTGCAATG AGGGCAGCCG ATCTTGCCAA GCAGATGCTT GCCTACTCCG GCAAAGGGAA ATTCGTCATA GAAAAGCTGG ACCTGAACCG GCTGATCGAA AAGCTGCACC CGATCCTGGA ACCGTCGCTA CCGACCAATG CCGTCCTGAT ACTGAAGCTC CATAAGCCGC TCCCGATGAT CGAAGCCGAC GCCAACCAGA TGCGGCAGAT AGTGATGAAC CTGTTCATGA ACGCGGTAGA GGCACTTGGC GATAACGGCG GCAAGATAAT CATCAGCACC TATGACGGCG TACAGGACAG GGAAAGCCTG AAGGACGTGT TACTGGCCGA AACCATAGCT GAAGGAAGCT ACGTGCTCTT GGAGATAACG GACACCGGTT GCGGCATGGA GGAGGAAGCC CTCGAGAAAG TCTTCGACCC CTTCTTTACC ACCAAGTTCA CCGGCCGGGG GTTGGGCCTT GCCGCCGTGC ACGGCATAAT CAGGGGTCAC AAGGGTGGGA TAAGGATATC CAGCGAGCCC GGCAAGGGAA GCAGCTTCCA AGTGCTGCTG CCTACCTCGG AGCCAACCCC GCTCGAGGTT TCGGTCCCGG AGGGAATCGA GAATAGCTGG AACGGCGAGG GTAGAATCCT GCTGGTGGAC GACGAGGAGG TAATAAGAAC CGTCGCGTCC GAACTGCTTA AAGAGCTGGG GTTCACCCCG GTTACCGCAG GCAGTGGCGC CGAGGCCATA GAAACCTTCA AGAACCACCG CGACCTTCGC GCCGTCATCC TGGACCTGAC CATGCCGGGC ATGGACGGCG AGGAGTGTTT CCGCGAACTG CGGGGGATCG ATCCCGAGGT AAAAGTGATC ATGTCCAGCG GCTTCAGCGA ACAAGAAGTG GTCCAAAAGT TTGCCGGCGA GGAGCTGGCA GGATTCATCC AGAAGCCGTA CACCCTCAAA ACCCTCAAGG AGGTGATGCG GAAGGTGTAG
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Protein sequence | MPTTPPPVDN PPSTSLWAKT IHILPYLVMA LSFLMTFFFW RQYDNSLNVR SQVVFNDRAD EVMDRFFTRM TDDEQILRGA AGLCNASKDV KRDEWRRYAL SLSLDKNFPG FQGLGLTEVV RPRDLQRHIQ RIRGEGFPNY RLWPEGERQE YTAIIYLEPF DWRNQRAFGY DMFSEPIRHE AMAKARDLGE AVTTGPVTLV QETKTDKQTG VLMYIPVYEL GLPLETVAQR RVAVKGYVYS PIRIKDFLSA TFPRVPKDIG FRIYTDKEPN PAGLIYDSVS DSNLNLPDSY RGELQTTRSF QRFGRNWLFT FESLPQFAQE QRKSQSRNYL IVGITVSILL SVIAFMLRSA HAGAIAAAQA LKESRERYRK ISEDSPAYIT TLLPDGTLTY VNPALAHDLG KRREDLLGKN FFEFLLPEYR EPVRQGLHSL SPQNPTYTVE QALVGPNEAV IWHEWTNRAL FDDHGGIAEF QGVGQNITER KNAAEERSRL EQQMLHAQKM ESLGVLAGGV AHDFNNILMA IIGNVDLSLM KIEEASPITA NLRNIEKAAM RAADLAKQML AYSGKGKFVI EKLDLNRLIE KLHPILEPSL PTNAVLILKL HKPLPMIEAD ANQMRQIVMN LFMNAVEALG DNGGKIIIST YDGVQDRESL KDVLLAETIA EGSYVLLEIT DTGCGMEEEA LEKVFDPFFT TKFTGRGLGL AAVHGIIRGH KGGIRISSEP GKGSSFQVLL PTSEPTPLEV SVPEGIENSW NGEGRILLVD DEEVIRTVAS ELLKELGFTP VTAGSGAEAI ETFKNHRDLR AVILDLTMPG MDGEECFREL RGIDPEVKVI MSSGFSEQEV VQKFAGEELA GFIQKPYTLK TLKEVMRKV
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