Gene GM21_1253 details

Gene Information

• Locus tag: GM21_1253
• Symbol: smpB
• ID: 8136578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1461932
• End bp: 1462405
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644868867
• Product: SsrA-binding protein
• Protein accession: YP_003021072
• Protein GI: 253699883
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 81
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCGAAA AGTTGATTTG CAACAACAAG AAGGCGTTCC ATGACTATTT CATAGAGGAG 
CGATATGAGG CGGGCATGGT GTTGCAGGGG ACAGAGGTCA AGTCCCTTCG CAATGGCAAG 
GCTAACCTGA ACGACTCCTT TGCGATGGTC AAAAACGGGG AAGCCTTTCT GCACAACTTC 
CATATACTCC CCTACGACTT CGGCAACAGG GAAAATCACG ATCCGGACCG GATGCGCAAG 
CTTCTCCTGC ACAAAAAGGA GATCGTGAAA CTCTTCTCGA AGATCAGGGA ACAAGGGTAC 
ACGCTGATCC CGCTGAGGAT TTACTTCAAG GACGGCAAGG TAAAAGCGGA GCTGGGCTTG 
GCCAAAGGGA AGAAGAACTA CGACAAGCGC GAAGTACTGA AGCAAAAGGA CGTGCAGCGT 
GATATCGTCG CAGGCCTCAA AGAAAGAAGC CGCGGCAGCA GGGATAGGGA ATAA 

 

Protein sequence

MGEKLICNNK KAFHDYFIEE RYEAGMVLQG TEVKSLRNGK ANLNDSFAMV KNGEAFLHNF 
HILPYDFGNR ENHDPDRMRK LLLHKKEIVK LFSKIREQGY TLIPLRIYFK DGKVKAELGL 
AKGKKNYDKR EVLKQKDVQR DIVAGLKERS RGSRDRE