| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1231 |
|---|
| Symbol | |
|---|
| ID | 8136556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1436997 |
|---|
| End bp | 1438307 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644868845 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_003021050 |
|---|
| Protein GI | 253699861 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.000207213 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGA TAAAGATTGG CCTTCTCGGT TTCGGCACCA TCGGTGCCGG TGTGGTAAAG
CTTCTTGCCG CGAACAGCGC GCTTTTGACG GAGAAAACCG GCACCCGGAT TTCCCTGAAG
AGCATCGTCG ACCTCGACAT CACCACCGAC CGCGGCGTCA GCACCGAAGG GATCATTCTC
ACCCGCAACG CCGAAGAAGT GCTGACCGAT CCGGAAATCT CCGTAATCAT CGAGCTGATC
GGCGGCTACG AACCCGCCCG CAGCTTCGTC CTTAAGGCCA TCTCTCACGG CAAGCACGTG
GTAACCGCCA ATAAGGCACT GCTGGCTGTT CACGGCGAGG AAATATACGC TGCCGCCAAG
GCAAACGGCG TCGAAATCCT TTTCGAGGCT GCCGTGGGCG GGGGCATCCC GGTCCTTTCC
GCCATCAAGG GGAACCTGGC GGGGAACCGT TTCTCGACCG TGCTCGGCAT CGTGAACGGC
ACCTGCAACT ACATCCTGAC CCGGATGACC CATGATGGAG CGGACTTCTC CGAAGTGCTG
AAGAGCGCCC AGGAATTAGG CTACGCCGAA GCCGACCCCA CCTTCGATAT AGAGGGCGTC
GACACGGCGC ACAAACTCTG CCTGCTGCTC TCCCTTTGTT TCGGAACCAA GATCGACCTG
AAAGACATCT ATTCCGAAGG GATCACCTCT ATTTCCTCGG AAGACGTCGA CTTCGCCAAA
TCCTTCGGCT ATCGCATCAA GCTTTTGGCC ATAGGGAAGA TGGATGGCGG GCAGATCGAG
GCGCGCGTGC ATCCGACCAT GATCCCGATC GACTACCCGC TGGCCGACGT GCACGGCGTG
TTCAACGCCA TCAGGCTCAC CGGCGACTTC ATCGGCCCGG TGATGTTCTA TGGCAGGGGC
GCGGGGATGG ACGCAACCGC GAGCGCCGTA GTAGGCGACG TCATCGACCT TTCCCGGAGC
ATGGGGGCCG GCATCTCCCG CCGCTGCGCG CCGCTTGGGT ACCTCGACGA GAAAGTCAGC
ACCCTGCCGA TCAAGCCCAT GGGCGAGATC GTGAGCAAGT ACTACATCCG TTTCCAGGCG
CTGGATCGTC CCGGCGTGCT GGCGCGCATT GCTGGAGCCC TGGGGGCCAG CGGCATCAGC
ATCGCCTCCA TGCTGCAGAG CGCCAGAAGC GCGAGCGAAA TAGTTCCCAT CGTCATCATG
ACCCACGAGG CGCGCGAAGC AGACGTGCGC CGGGCGCTTG CCGAGATCGA CACCTACGAG
GTCATCCGCG GCAAGAGCAC CTTCATCAGG ATCGAGGACA ACCTCGAATA A
|
|---|
| Protein sequence | MKEIKIGLLG FGTIGAGVVK LLAANSALLT EKTGTRISLK SIVDLDITTD RGVSTEGIIL
TRNAEEVLTD PEISVIIELI GGYEPARSFV LKAISHGKHV VTANKALLAV HGEEIYAAAK
ANGVEILFEA AVGGGIPVLS AIKGNLAGNR FSTVLGIVNG TCNYILTRMT HDGADFSEVL
KSAQELGYAE ADPTFDIEGV DTAHKLCLLL SLCFGTKIDL KDIYSEGITS ISSEDVDFAK
SFGYRIKLLA IGKMDGGQIE ARVHPTMIPI DYPLADVHGV FNAIRLTGDF IGPVMFYGRG
AGMDATASAV VGDVIDLSRS MGAGISRRCA PLGYLDEKVS TLPIKPMGEI VSKYYIRFQA
LDRPGVLARI AGALGASGIS IASMLQSARS ASEIVPIVIM THEAREADVR RALAEIDTYE
VIRGKSTFIR IEDNLE
|
|---|
| |