Gene GM21_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1227 
Symbol 
ID8136552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp1433810 
End bp1434454 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID644868841 
Productriboflavin synthase subunit alpha 
Protein accessionYP_003021046 
Protein GI253699857 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.00725897 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCACAG GTCTGATAGA AACAGTAGGC GAGTTGGTCT CCATCGAAAA GCGGGGCGCC 
TCGGGTAGCC TCACGGTGAA GACCTCGCTG CCGCTGGACG AAGTCGCCAT CGGCGCCTCG 
ATCGCCATCA ACGGCGCCTG CCTCACCGTG GTCCGCAAGG GGGGCGGGGC CGTTACCTTC 
GACATCTCGC CCGAAACCAT CGACCGCACC GGCTTCAAGA ACCTCAAAAG CGGCTCCCCG 
GTCAACATGG AGCGCGCGAT GAGGCTCTCC GACCGCCTGG ACGGGCACCT GGTCTCAGGC 
CACGTCGACT GCGTCGCCAC CGTCATCGAG CGGCGGGAGG TCGCCGGAAA CATCGTCTTC 
TCCTTCCGGT TTCCGCACCA GTACGGCAAG TACATCGCTG CCAAAGGCTC CGTCGCCATC 
GACGGCATCA GCCTCACCGT GAACTCCGCC GGCCCCGACA GCTTCAGCAT CAACGTGATA 
CCGCACACCG CGGCAAAGAC CACGCTCATC GGGAAGCGCG TGGGAGACGA GGTCAACATC 
GAGACGGACC TTTTGTGCCG ATACCTCGAG CGCTTGCTGG CGGGCAGGGA AAACGGCGGT 
GAAGGAGTGA CGCTGGACCT GCTGGCAAAA AGCGGCTTCA TGTAA
 
Protein sequence
MFTGLIETVG ELVSIEKRGA SGSLTVKTSL PLDEVAIGAS IAINGACLTV VRKGGGAVTF 
DISPETIDRT GFKNLKSGSP VNMERAMRLS DRLDGHLVSG HVDCVATVIE RREVAGNIVF 
SFRFPHQYGK YIAAKGSVAI DGISLTVNSA GPDSFSINVI PHTAAKTTLI GKRVGDEVNI 
ETDLLCRYLE RLLAGRENGG EGVTLDLLAK SGFM