| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1226 |
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| Symbol | |
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| ID | 8136551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1432561 |
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| End bp | 1433670 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644868840 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003021045 |
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| Protein GI | 253699856 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.078845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACC TACACCTTAA AATGATGCGC CTGGCGCTTT GCGAGGCCAG AAAGGGAGTC
GGCAAGACGG CCCCCAACCC GGCCGTCGGC TGCGTCATCG TCCGGGACGG CGAAGTGGTC
GGGACCGGCT GGCACAAAAA GGCGGGGACC CCGCACGCCG AGGTGCATGC GCTTAAGGCC
GCCGGCGAGA AGGCGGCCGG CGCCGACGCC TACGTGACCC TTGAGCCCTG CTCCCATTTC
GGCAAGACCC CCCCCTGCGC GAAAGCGCTC ATCGAGGCGA AAGTGGCGCG CGTCTTCGTC
GCCATGGTCG ACCCCAACCC GCTTGTCTCC GGGAAGGGGA TCCAGATGCT CAAGGACGCG
GGGATAGCAG TCGAGGTGGG ACTCTTGGAA GAGGAGAGCC GTGAGCTGAA CCTTCCCTTC
ATCAAGTGGA TCCAGACCAG GCTCCCCTTC GTGGTGCTGA AGAGCGCGCT AACGCTGGAC
GGCAAGAGCG CCACGGCAAG CGGCGACTCC AAGTGGGTGA CCAGCGACCG GGCCCGGCGT
GAGGTGCACC GGCTGCGCGG CCGCCTGGAC GCCATCATGG TCGGCGTCGG TACCGTGGCG
AAGGACGATC CGCTTTTGAC CTGCAGGGTC CCCGGCGGCA AAGATCCGCT GCGGGTGATA
GTCGACTCGA CCCTCAGGAT ACCGCTGCAC GCCGCGGTCC TCGGAGTGCC TTCCAAAGCT
CAGACGATCA TCGCCACCTG TAGCGGCGAC GAGGCAAAGA TGCAAGCGCT CAAGGCGCAC
GGCGTCGAGA TCCTCACTTG CTGCGAGAGC GACGGGCGGG TCGACCTTGC CGATCTCTTC
GTAAAGTTGG GTGCGCGCGG CGTGCAGTCC GTGCTGCTCG AAGGCGGAAG TCACCTGGCA
GGGGCAGCTC TTCGTGCCGG GCTCATCGAC AAATGCATGA TCTTTCTGGC GCCGAAGCTC
GTGGGAGGAG CAGGCATGGG GCTCTTCGCC GGCGAGGGGG CGACGCTGAT GGCAGACGCC
ATACGGTTGG AGCAGATGAG GGTAAAGCGA GTGGGAGTCG ACCTCCTGGT GGAGGGAGTC
CCCGCAAAAA CAAAAAGTCA GAACCACTAA
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| Protein sequence | MSDLHLKMMR LALCEARKGV GKTAPNPAVG CVIVRDGEVV GTGWHKKAGT PHAEVHALKA
AGEKAAGADA YVTLEPCSHF GKTPPCAKAL IEAKVARVFV AMVDPNPLVS GKGIQMLKDA
GIAVEVGLLE EESRELNLPF IKWIQTRLPF VVLKSALTLD GKSATASGDS KWVTSDRARR
EVHRLRGRLD AIMVGVGTVA KDDPLLTCRV PGGKDPLRVI VDSTLRIPLH AAVLGVPSKA
QTIIATCSGD EAKMQALKAH GVEILTCCES DGRVDLADLF VKLGARGVQS VLLEGGSHLA
GAALRAGLID KCMIFLAPKL VGGAGMGLFA GEGATLMADA IRLEQMRVKR VGVDLLVEGV
PAKTKSQNH
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