Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1223 |
Symbol | |
ID | 8136548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1429076 |
End bp | 1431346 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868837 |
Product | RNA binding S1 domain protein |
Protein accession | YP_003021042 |
Protein GI | 253699853 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.572551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATGC ACGCAACAGA AACACCTCAA TTGCTTGAAA TCATAGTCGA AGAAAGCGGG CTGCCGCGCG GCGGCGTGCT CCAGACGGTG GCGCTTTTGA ACGAGGGGGG GACCGTCCCC TTCATCGCGC GCTACCGCAA GGAGCAGACC GGGGAACTGG ACGAGGTGCA GATCCGCCAG ATCGAGGACC TGCTGATCTA CCACCGCGAG CTGGCCGAGC GCAAGGTCAC GGTGCTGAAG AGTATCGAGG AGCAGGGAAA ACTCACACCG GAGCTTTCCG CCCGGATCGC GAGCTGCCGC AAGAAGACCG ACCTGGAGGA CCTTTACCTC CCCTACAAGC CGAAGCGCCG CACCAAGGCC ACCATCGCTC GGGAGAAGGG GCTGGAGCCC TTGGCCGAGC TGATCGCGGC GCAGGAACTG GCGACGGGAA GCCCGACCGA GGCGGCGGCC CCTTTCGTCA ACGCGGAGTT GGGCGTAACC GACGCAGAGG CAGCCCTCGC GGGGGCGGCG CACATCATAG CCGAGCAGTT GAGCGAGAAC GCGGACCTGC GAGGCAGGGT GCGCGACCTG ACCAGGGAGC AGGGGATATT CGGCTCGCAG CTGATGGGCG ACGGGGCCGA CAAGGACGGG AAATTCCGGA TGTACCACGA CTACCAGGAG CCGCTCAAGT CGATACCGTC CCACCGCATG CTCGCCATGC GGCGCGGCGA GAAGGAAGAC GTCCTGAGGC TCGCCCTGCT GGCGCCGGAA GAGGAGATCG TCGGGAGACT GAAGGGGGCG TTGGTCAAAC GTGAAAGCAT CTTCAAGGGC ATCCTTGAAG CGGCGGCCGC CGACGCCTAT AAGCGGCTCA TCGCCCCGTC GATCGAGGTG GAGCTTAGGC TTGAGGCGAA GACCCGCGCC GACGAGGCGG CCATCGCCGT CTTCGCGCAG AACCTGAAGA ACCTGTTGCT TCTCCCCCCC GCCGGAGGGA GGCGGGTGCT CGGGATCGAC CCAGGCCTTA GAACCGGCTG CAAGCTCGCA GCAATCAGCG AGACCGGGCG CTTCCTGGAG CATGTCACCA TCTACCCGCA CACCGGCGGA GCCAAGGCGG AGGCTGCCGG TGCCGAGCTT GCCGGGATGG TAGAGCGCAA CGACTGCCGC CTCATCGCCA TCGGCAACGG CACCGGAGGG CGCGAGACCG AGATCTTCGT GCGGGACGCA TTGAGGAAGG CGGGGATAAA GGCGGAGACG GTGATGGTGA ACGAGGCCGG CGCCAGCATC TATTCGGCAT CGGACATCGC CAGGGAAGAG TTCCCCGAAC TCGACCTGAC CGTCCGCGGC GCCATATCCA TCGGCCGAAG GCTCCAGGAC CCTCTCGCCG AACTGGTGAA GATCGATCCC AAGAGCATCG GGGTCGGCCA GTATCAGCAC GACGTGAACC AGACCCTGCT GAAAAAGGCG CTGGACGCGG TGGTGGAATC CTGCGTCAAC TTCGTCGGCG TCGACTTGAA CAGCGCGTCG TGGGCCCTGC TCTCCTACGT TGCCGGCCTC TCCGAAAGCC AGGGGCGGGC CATAGTCAGG CACCGGGACG AACAGGGGGC CTTCGCCTCG CGGCAGTCGC TCCTCAAGGT GGCGCGCTTC GGTCCCAAGG CGTTCGAGCA GGCAGCGGGC TTTTTGAGGA TCAGGGGTGG CGAGAACCCC CTGGACAATA CGGCGGTACA CCCCGAGAAC TACGCGGTGG TCGAGAAGAT GGCGGCTGAC CTCGGGGTGA GCCTGTCGCA ACTGGTGGCG GACCCGGGTC TTTCGGCCGG TATCAGGATC GAGCGCTACG TGACCGACAC CATCGGAATC CCGACGCTGC GCGATATCCT GGCGGAGCTT AAGAAACCGG GGCGCGACCC GCGCGAGCAG TTCCAGAGCG CGAGCTTCCG CGAGGATGTG GTGACCATCG CCGACCTGAA GGAGGGGATG ATCCTGCAGG GGGTGGTGAC CAACGTCGCC GCCTTCGGCG CCTTCGTGGA CATCGGGGTG CACCAGGACG GGCTCGTGCA CGTAAGCCAG CTCACGCACA GGTTCACCAA GGACCCAAAC GATGCGGTCA AGGTGGGGCA AATCGTGAAG GTAAAGGTGC TTTCGGCTGA TCCGGAGAGG AAGAGAATCT CGCTCTCCAT CAAGCAGGCG GAACCCGAAA AAGCGCAGAA GAACGCGGAA GTCAGAAAGC CGCAGCCCAA AGAAAAGCCG GTGAACGAGC AATCGGCGTG GGAAAAGGCG GGTTTCAGGG TGAAGAAGTA A
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Protein sequence | MTMHATETPQ LLEIIVEESG LPRGGVLQTV ALLNEGGTVP FIARYRKEQT GELDEVQIRQ IEDLLIYHRE LAERKVTVLK SIEEQGKLTP ELSARIASCR KKTDLEDLYL PYKPKRRTKA TIAREKGLEP LAELIAAQEL ATGSPTEAAA PFVNAELGVT DAEAALAGAA HIIAEQLSEN ADLRGRVRDL TREQGIFGSQ LMGDGADKDG KFRMYHDYQE PLKSIPSHRM LAMRRGEKED VLRLALLAPE EEIVGRLKGA LVKRESIFKG ILEAAAADAY KRLIAPSIEV ELRLEAKTRA DEAAIAVFAQ NLKNLLLLPP AGGRRVLGID PGLRTGCKLA AISETGRFLE HVTIYPHTGG AKAEAAGAEL AGMVERNDCR LIAIGNGTGG RETEIFVRDA LRKAGIKAET VMVNEAGASI YSASDIAREE FPELDLTVRG AISIGRRLQD PLAELVKIDP KSIGVGQYQH DVNQTLLKKA LDAVVESCVN FVGVDLNSAS WALLSYVAGL SESQGRAIVR HRDEQGAFAS RQSLLKVARF GPKAFEQAAG FLRIRGGENP LDNTAVHPEN YAVVEKMAAD LGVSLSQLVA DPGLSAGIRI ERYVTDTIGI PTLRDILAEL KKPGRDPREQ FQSASFREDV VTIADLKEGM ILQGVVTNVA AFGAFVDIGV HQDGLVHVSQ LTHRFTKDPN DAVKVGQIVK VKVLSADPER KRISLSIKQA EPEKAQKNAE VRKPQPKEKP VNEQSAWEKA GFRVKK
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