| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1211 |
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| Symbol | |
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| ID | 8136536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1417426 |
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| End bp | 1419198 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644868825 |
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| Product | type VI secretion protein, VC_A0110 family |
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| Protein accession | YP_003021030 |
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| Protein GI | 253699841 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 141 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATG ACTTCCTAGA CTATTACGAA AAGGAACTCA GCTTCATTCG CGAGATGGGG
AGCGAGTTCG CCAGGAAATA TCCGGGCATT GCGGGAAGGC TTCTGCTTGA GCCGGACAGG
TGTGAGGACC CGCATGTCGA GAGGCTCATC GAGGCCTTTG CCCTAATCTG CGCGAGGATG
CACAAAAAGC TCGACGACGA TTTCCCAGAG ATCACGCAGT CCCTTCTGAA CGTTCTTTAC
CCGCACTGCA CGAACCCCAT ACCTTCCCTG TCGGTGGTCA GATTCTCTCC CCTGATGAAG
AACGTTCCGG ATACCGGTTA CCTGGTCCCG AAAGGGACGA CCCTGTTTTC CCGTGCGCTC
GACGGCGTTC GCTGCCGGTT CGCCACCGCC TACCCCGTGA CGCTCTGGCC TATGGAAGTG
GCGCATGCTG CGCTGGCGGA TCAGGTCATC ACCATCAGGC TGAAGCTGCA CAACAAGGTA
ACCTTCGCGC GCTTTTCCTC CGACAGCATC CGTTTCTACC TGAATGGCCA ACGCCAGCAC
ACCTTTCAGC TCTACGAGCA GTTGCTCAAT AACGTCTCCC GCATCGAATG CGTGGCGGTC
GGGAAAAAGA TCCCCCCGGT AGCGCTGACG AAGAACAGCA TCCGCCCGGT GGGATTTGAC
GAACAGGAGA TGCTGCTCCC CTTCCCAAGG CAGTCGTTCA AGGGGTACCG CCTGCTGTTG
GAATACTTCG CCTTCCCGGA AAAGTACCTC TTCCTGGAAC TGTCGGGACT GTCTTCCGCG
CCCCTCGGGG ATTTCGGAGA CACACTGGAT CTGGCCATTC ATCTGGACCA CCCGACCGGA
CCTTCCTTCC CTGTCAGCGC TGATACCTTC TGTCTCCATG CCACCCCGGC CGTCAACCTC
TTCAGCAAAA TCGCCGAACC GATCCGGATC GAGAACCGTC GGGCAGAGTA CCGGGTAGTC
CCCGAGTTAC GGTCCCCCGA AGCGATGGAG ATCTTCAGCA TCGACCAGGT AAGCGGCATG
TCCGATGCGC CCGCCCCGGT CACCAGGGTT TACCGGCCCC TCTACGAAAT TACCCGCCCC
GACGGCGGAA GCATTGGCGA CGTCGAGGGG GTGTGGTGGC TGATGCAGCG CAAGGCTTCA
GGGACAGCTG GGGATCGCGG TACCGAGGTC TTTCTCTCCT TTTGCGATCT CGCTTCAGAT
CCCGCCGATC CGCCAGATGA AACCGTGACC CTGCGGCTGA CCTGCAGCAA CCGCGATCTT
CCCGGCGCGC TCCCCTGGGG GGATCCGGCC GGCGATTTCG ATATCGAGGC TGCTGCGCCG
GTCGAAGCGA CCAATGCCGT GGTCAGGCCG ACGGCTGTGC GTCGTCCCGC CTTGTCCGGG
GCTTCGCAAT GGCGGCTCAT CTCGCATCTT TCCCTCAACC ATCTTTCGCT TCTGGAAGCG
GATGGGGCAG CGCTCAAGGA CATGCTGAGG CTGTACGACT TCGAGGATTC CCCCGCGACA
CGACAGCAGA CAAATGGGAT CGTGTCGGTC TCTTTCAGGC ACGTCACCAG GAGGATCGGC
GCTCTTATTT GTCGTGGCGT CGAAGTCACC ATCGAGTTCG ACGAGCGGCA GTTTGTCGGG
AGCGGGGTCT ATCTTTTTGC CTCAGTCCTG GAGAGGTTTC TGGGAGAGTA CGTCTCGCTG
AATTCCTTCG TGCAACTTGT CGCCAAGAGT AGCCAACGTA AGGAGGTCAT GAAGAAATGG
CCGCCTAGGA ACGGGGACCG GGTGCTGCTG TGA
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| Protein sequence | MGDDFLDYYE KELSFIREMG SEFARKYPGI AGRLLLEPDR CEDPHVERLI EAFALICARM
HKKLDDDFPE ITQSLLNVLY PHCTNPIPSL SVVRFSPLMK NVPDTGYLVP KGTTLFSRAL
DGVRCRFATA YPVTLWPMEV AHAALADQVI TIRLKLHNKV TFARFSSDSI RFYLNGQRQH
TFQLYEQLLN NVSRIECVAV GKKIPPVALT KNSIRPVGFD EQEMLLPFPR QSFKGYRLLL
EYFAFPEKYL FLELSGLSSA PLGDFGDTLD LAIHLDHPTG PSFPVSADTF CLHATPAVNL
FSKIAEPIRI ENRRAEYRVV PELRSPEAME IFSIDQVSGM SDAPAPVTRV YRPLYEITRP
DGGSIGDVEG VWWLMQRKAS GTAGDRGTEV FLSFCDLASD PADPPDETVT LRLTCSNRDL
PGALPWGDPA GDFDIEAAAP VEATNAVVRP TAVRRPALSG ASQWRLISHL SLNHLSLLEA
DGAALKDMLR LYDFEDSPAT RQQTNGIVSV SFRHVTRRIG ALICRGVEVT IEFDERQFVG
SGVYLFASVL ERFLGEYVSL NSFVQLVAKS SQRKEVMKKW PPRNGDRVLL
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