Gene GM21_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1208 
Symbol 
ID8136533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1414938 
End bp1416425 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content61% 
IMG OID644868822 
Producttype VI secretion protein, EvpB/VC_A0108 family 
Protein accessionYP_003021027 
Protein GI253699838 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones153 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGC AAGATAGAGA ACCGGAAGTA CTGTACGCTG AGCCGCTACC CGCGGGAGGC 
CTGCTGGAGC TCATCATCCA GGAAGGGCGA CTTGCCCGCG GCGTCTGTCG TCATGAGCAT
GCAGTGGACC TTGTGGGCGA ACTGGCGCAA CAGGTCCTTG AGGGCGAGAT GACGGTGACC
CGCGACACGG AACAGATGAT CAACCAGAGG ATCGCCCAAC TGGACGCGCT CATCTCCGGG
CAGGTGAACG AGATCATCCA CCATCCCGAA TTCCAGAGGT TGGAAGCCTC CTGGCGCGGC
CTTGACCATC TGGTGCACCA AAGCGAGACC GGAGCCAACC TGAAGATCAG GGTCCTGAAC
GTTTCGCGCC GGGACCTCGT GCAGGACATG GAGAAGGCGG CAGAGTTCGA TCAGTCCGCT
CTGTTCAAGA AGGTGTACGA GGAGGAGTTC GGCAGCTACG GGGGGGCTTC CTACGGTTGC
CTGGTGGGTG ACTTCGATTT CGGCAACACG CCGCAGGACC TTTCGCTGCT GACACGGATG
TCCGAGGTCG CGGCTGCCGC GCACGCACCG TTATTGACCG CTGCTTCTCC TTCCCTGTTC
AACATGGAGA CCTTCGCTGA ACTCGACAGG CCCAGGGACT TGGCCAAGAT CTTCCAGGGG
CCGGAATACG CCAAGTGGAA ATCCTTCCGG ATCTCCGAGG ACGCCCGTTA CGTTGCCCTT
TGCCTACCCA GGGTGCTGAT GCGGCTTCCC TACGGACCCG ACGCCGATCC GGCTGAACTA
TTCCAGTTCG ATGAGGAGGT GGACGGCGCC GATCACGGCA AATATCTCTG GGGCAACGCC
GCCTACTGTC TGGCCGAACG GGTGACCGAA GCCTTCGCGA AATACGGCTG GACAGCGGCG
ATCAGGGGAG TGGAGGGGGG CGGTCTTGTG AGCGAGCTGC CCGTGCACTC CTTCAAAACC
GGGGAAGGGG AACTGGCCCA CAAGTGCCCC GCTGAGATTG CCATTACCGA CCGGCGCGAA
AAGGAGTTGG CGGACCTGGG TTTCATTCCG CTGGTCCATT GCAAAGGGAC CGACAACGCC
GCGTTCTTCA GCGCCCAAAG CGCGCACCGT CCCAGGAGCT ACGACTCCGA TGCGGCCAAC
GCCAACGCAC GGCTCTCGGC GCAGTTGCAG TACATCCTCG CCGTCTCGCG ATTCGCCCAT
TACCTGAAGG CGCTGATGCG CGACAAGGTC GGCAGCTTCG ACACCAGGAA GAACGTGGAG
GACTACTTGA ACCGCTGGAT CAGCAACTAC GTGCTTTTGG ACGACGACGC CGGCCAGGAG
ATGAAATCGC GGTACCCACT GCGGGAGGCC CGGGTGGAGG TTTTCGAAGA TCCCGCCAAG
CCAGGGGCCT ACCGCGCCGT CGCTTTTTTG AAGCCGCACT TCCAGCTTGA CGAACTTACC
GTCTCCCTGA GGCTTGTGGC CAGTCTGCCG GCACCGGCAA GAGAATAA
 
Protein sequence
MGEQDREPEV LYAEPLPAGG LLELIIQEGR LARGVCRHEH AVDLVGELAQ QVLEGEMTVT 
RDTEQMINQR IAQLDALISG QVNEIIHHPE FQRLEASWRG LDHLVHQSET GANLKIRVLN
VSRRDLVQDM EKAAEFDQSA LFKKVYEEEF GSYGGASYGC LVGDFDFGNT PQDLSLLTRM
SEVAAAAHAP LLTAASPSLF NMETFAELDR PRDLAKIFQG PEYAKWKSFR ISEDARYVAL
CLPRVLMRLP YGPDADPAEL FQFDEEVDGA DHGKYLWGNA AYCLAERVTE AFAKYGWTAA
IRGVEGGGLV SELPVHSFKT GEGELAHKCP AEIAITDRRE KELADLGFIP LVHCKGTDNA
AFFSAQSAHR PRSYDSDAAN ANARLSAQLQ YILAVSRFAH YLKALMRDKV GSFDTRKNVE
DYLNRWISNY VLLDDDAGQE MKSRYPLREA RVEVFEDPAK PGAYRAVAFL KPHFQLDELT
VSLRLVASLP APARE