Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1207 |
Symbol | |
ID | 8136532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1414396 |
End bp | 1414926 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868821 |
Product | type VI secretion protein, VC_A0107 family |
Protein accession | YP_003021026 |
Protein GI | 253699837 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 162 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGT CCGAGAGCCT GCAACACAAG TTGGAACGCG TGCGGGCGCC CCGTGTCCGC ATCACCTACG ACGTGGAGAC CGGGGGCGGC ATCGAGATGA AGGAGATCCC TTTCGTGGTG GGGGTGCTCG CCGACCTGTC GGGGAAGCCG GATCAACCCC TGCCGAGGCT GAAGGAGAGG AGCTTCGTGG AAGTGGACCG CGACAACATT GATTCGGTCT TGGAGGGAAT GCGGCCGAGA GCTGCGTTCC GGGTCCCGAA CCGGCTGGTG GAAGACGGCT CCCAACTCGC CGTCGACCTC CGTTTCACAA GTCTCGATGA CTTTCATCCG GAGAAGGTGG CCCTGCAGGT GGAGCCGCTT CGGAGACTGG TCGAGGCGCG GAAGAGGCTC TCGGATCTGC TCGCGAGGCT CGACGGCAAC GACCGGCTCG AACAGCTGCT GCGGGGGGCG TTATCCAGTC CGGATGCGCT GAAACTCATC TGTGAGGAGG CGAAGAGCGC CAAGGCACCC GACACTGAGA GCGCCGGATA A
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Protein sequence | MAKSESLQHK LERVRAPRVR ITYDVETGGG IEMKEIPFVV GVLADLSGKP DQPLPRLKER SFVEVDRDNI DSVLEGMRPR AAFRVPNRLV EDGSQLAVDL RFTSLDDFHP EKVALQVEPL RRLVEARKRL SDLLARLDGN DRLEQLLRGA LSSPDALKLI CEEAKSAKAP DTESAG
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