Gene GM21_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1207 
Symbol 
ID8136532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1414396 
End bp1414926 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID644868821 
Producttype VI secretion protein, VC_A0107 family 
Protein accessionYP_003021026 
Protein GI253699837 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones162 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT CCGAGAGCCT GCAACACAAG TTGGAACGCG TGCGGGCGCC CCGTGTCCGC 
ATCACCTACG ACGTGGAGAC CGGGGGCGGC ATCGAGATGA AGGAGATCCC TTTCGTGGTG
GGGGTGCTCG CCGACCTGTC GGGGAAGCCG GATCAACCCC TGCCGAGGCT GAAGGAGAGG
AGCTTCGTGG AAGTGGACCG CGACAACATT GATTCGGTCT TGGAGGGAAT GCGGCCGAGA
GCTGCGTTCC GGGTCCCGAA CCGGCTGGTG GAAGACGGCT CCCAACTCGC CGTCGACCTC
CGTTTCACAA GTCTCGATGA CTTTCATCCG GAGAAGGTGG CCCTGCAGGT GGAGCCGCTT
CGGAGACTGG TCGAGGCGCG GAAGAGGCTC TCGGATCTGC TCGCGAGGCT CGACGGCAAC
GACCGGCTCG AACAGCTGCT GCGGGGGGCG TTATCCAGTC CGGATGCGCT GAAACTCATC
TGTGAGGAGG CGAAGAGCGC CAAGGCACCC GACACTGAGA GCGCCGGATA A
 
Protein sequence
MAKSESLQHK LERVRAPRVR ITYDVETGGG IEMKEIPFVV GVLADLSGKP DQPLPRLKER 
SFVEVDRDNI DSVLEGMRPR AAFRVPNRLV EDGSQLAVDL RFTSLDDFHP EKVALQVEPL
RRLVEARKRL SDLLARLDGN DRLEQLLRGA LSSPDALKLI CEEAKSAKAP DTESAG