Gene GM21_1204 details

Gene Information

• Locus tag: GM21_1204
• ID: 8136529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1408963
• End bp: 1409622
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644868818
• Product: type IV / VI secretion system protein, DotU family
• Protein accession: YP_003021023
• Protein GI: 253699834
• COG category: [S] Function unknown
• COG ID: [COG3455] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03349] type IV / VI secretion system protein, DotU family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 170
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGATTGA TCGACTCTTT CATGCCGCTC ATAGCCTACG TGGTCGACTT CCGCGCCGCT 
TGCCGCGACA CGCCCCGCGG TTATCAGGAG GTGAAGGGGG ATATCGCGCA GTTGCTGCTG 
CAGGCGGAAA AGGCATGCGG CAAGGAAGCG GTGGTGAGCG ACGAGTACGA TCTCGCCCGC 
TTCGCGGTCT GCTCCTGGGT CGACGAGACG CTCCTGGGTT CCGACTGGAG GGACAGGCAG 
CTCTGGCAGC GGGAGCAACT GCAGCGGCTT TATTACCGCA CCACAGAGGC GGGGGTGGAG 
CTTTTCGACC GGCTGCAGGC GCTGGGGGCG CGGGGCGAGG TGCGGGAGGT CTATTACCTC 
TGCCTCGCCC TTGGTTTCAA GGGGCGTTAT ATCGGGCCGG GAGACGAGGC CAAGCTGGAA 
CATCTGAAAC AAGAGAACCT GAAGTTGCTG CTCGGGACCC CGGCCGGCAT CCCGTCGCTG 
GAGCAGGGGG AGCTCTTCCC GGGTGCCCAT GCCCCCGGCC GCGAAAGTTC GGCCCTGAAG 
GCTCCCTCTG GAATTTCCCC GCTGACCGCG ATGCTGATCG CAGCACCCAT CTTCCTGTTC 
GTGGTGCTGT TTCTCATTTA CCGCTACCTG CTAAACGGCC TGGTGCTTCC GGTCCTCTAG 

 

Protein sequence

MRLIDSFMPL IAYVVDFRAA CRDTPRGYQE VKGDIAQLLL QAEKACGKEA VVSDEYDLAR 
FAVCSWVDET LLGSDWRDRQ LWQREQLQRL YYRTTEAGVE LFDRLQALGA RGEVREVYYL 
CLALGFKGRY IGPGDEAKLE HLKQENLKLL LGTPAGIPSL EQGELFPGAH APGRESSALK 
APSGISPLTA MLIAAPIFLF VVLFLIYRYL LNGLVLPVL