| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1197 |
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| Symbol | |
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| ID | 8136522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1392985 |
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| End bp | 1399224 |
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| Gene Length | 6240 bp |
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| Protein Length | 2079 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868811 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003021016 |
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| Protein GI | 253699827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 144 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGA TTACCATCAA AGCACTGCTG ACGCTTTGTG CACTCATGGG AGCCTTGCTC
TGGGGGGGCA ATTCATACGC CGACGACACG GACGGCACCA GTGTCTGGAC CATCGGGAAC
TTGGATCTAG GCGTCATCGA CGTATCCGAA TACGATTACA ACCTTTACCC GAACGGCGCC
ACGGACTGGT ACATTTCTTC GGCGATGTGG GACCCGCTGT ACAAGCAATG GTTCTGGTAC
CGGGTGGGAA CGGCCGAGAT GCAGACCTCG TTCAACGCGC TGCCGGTGAC TGCCTCCTAC
AGTGCCGACC GTACCAGCGT CACCGCGGTC TACACTGCTC CGGAATTCGT GGCCACGGTT
GTCTTCACCG TCCCCGACAA GCTGGACGAT TCCCTAAACT CCACCTTCGT GAAGAGTGTC
AGCATACAGA ACAGCACCGC TGCCGATCTC GATCTCCATC TGTATAGCTA CAACGATTTC
GACCTCTCAG GCCTGGATAA CGTACAGATC GTCGACGGCA GCAGGGCCGT GCAGAGCGAC
CTGCTCGGCA TGACGCTGGT TCAGACCTCC TCGATCAAGC CGAGTCACTA CGACATCGAC
ATGACGGCCT TCGTACTGAT AGATTCGCTG CAAAACGGAA CCTCTCCGCT TATTCTGTCC
GACGCCGCAG GCCCCTTCAC CGAGGGGGGC GACATGCAGT TCGCCCTCCA GTACGACCTG
ATGATCCCCG CCAACTACTC CGCCTCTCTC GTCGTTACCG ACAAGACCTA CACGACGCTC
CCTTTGGACA TCAGCTACTC GCAGGTGGGA GGCGCCTGTG GCAGCAACGG AAGCAATACC
ACCTACCAGG TCTGTGTGGG CAACCCCAAC GCCGTCGACG TCAACAACGT CAAGGTGAGC
TCGGTGGTGA CGCCGGCTGC CGGCGACCTT ACCGGCACCC TCTCCTTTGT CGGCGCCACG
GATGGGGGGA CCTACGACCC CGCCACCAAA AGCGTGAACT GGACCATACC GCTTCTTTCT
GCCGGTGCGG CAAACCTGTG CTATCAGGCG ACGGTAGTGA CAAACCTGAT GGAGGATTTC
AGCTCCAGGG CGAAAGCCTA CGGCGACGAA ACCTATCCGG CGCAGGCTGA AGTCATCACG
CCGCTTTGCA ACTACCCTCC GGTGGTGAAT TCGACTGCGG TGACCAAAGC AACTGTCGGC
ATGCCCTACG CCTACCAGAT AACCGCGACC GACCGCGAAA ACGACGCCCT GTCCTACACG
CTGGTCCAGT CTCCGGTGGG TATGACTCTG GACCCGGTCT CCAATACCTT GAATTGGACC
CCTACCATCG ACCAGAGGGA CGTCTATACC CCGGTCCAGG TCGACGTCAG CGACGGCTAT
TCCGTCGTGT CCCACAAATT CGGAGTTGTG GCGGAGGTTT TGAACCAGCC TCCGACCGCG
CCGGCTACCC AGAGCGTTAC CGGTCTGGCA ACGGAGCCCT TTTTCTACAT GGTTCAGGCT
TCCGATCCCG ACCGGCAGGT GCTCAACTAT TCCACCGCGG ACCTGCTCCC TCCCGGGCTT
TCGCTCGGCA ATACCGGTCT CATCAGCGGC ATACCCACTG TGGAAGGGAC CACTACCGTC
AACGTGAAGG CAACGGACCC GGGTCTGGCC GCTGCGTTTA CTGCGGTGAC CATCACCATC
GGGCCCGCTC CTATTCGTCC GCCCACCATC GCCCCCATTC CCGCCGCCAA GGTAGGCGCG
GGTAGCGAGT TCAGCTACCA GGTGGCGGCA ACCGACCCGC AGGGGCAGAC GCTGACCTAT
GGTCTCAGCG GGAATCCCCC GGGGATGACC ATCGGCAGCA CCGGTTTGAT CAGCTGGCCC
AAGACCGTGG TCGGGACCTA CACCATCACC GTTAACGCCA CCAACACCAG CATATTGAGC
GCTGCCACCA GCTTCGTTCT GACGGTGACC AACAGCGCGC CGGTGGTGAC GCAGGTCGAG
AACCAGTTTA ATTATCAGGG GGCGGCGGTA AGCCTTCCCA TCGTCGCCAC CGACATTAAC
GGCGACACCC TTAGCTACAG CGCGACGGGG CTCCCGCTAG GGCTCAGCAT CGACAGCGCG
ACCGGTGTCA TCAGCGGCAC GATTACCTAT CTGGCAGCCG ATACCCGCGC CACCATAACG
GTGACGGACG GCGCCCTAAC GTCCCAGATG GGCTTCATGT GGTACGTGGT CAAGGTGAAC
AACCCGCCGA CGGTCACCAA CCCCGGCGCC AAGACCAATA CCCCGGGGGC CGCGGTCACG
CTGCAGATCA AGGCAACCGA CCCCAACGGC GACACGCTCA CTTACAGCGC CACCGGTCTT
CCGGACGGCC TCAGCATCAA CAGCTCCACC GGTTATATCA GCGGCACCAT CTCCTACACC
GCGCTAACCA GCAACAACGT GACCGTAACG GTAAGCGACG GCACCGCTCC GGTATCGGTC
AACTTCCTCT GGAGCGTTAC CGGGGGGCAT GCGCCGGTTG TGACCAACCC CGGCATACAG
ATAAGCGCGC AGGGCGAGGC TGCTAGCCTG CAGATGGTAG CCACCGACTC CAACGGCGAC
GTCCTCAGCT ACGGCGCGAC CGGGCTGCCG GCCGGCCTCA GCATTAACGC CTCGACCGGT
CTCATCAGCG GTACTGTCTC TTCCACCGCG CTGCTCAACA ACAGCGTCAC GGTGACCGTG
ACTGACGGTT TGGCTCCTGT TTCGGTCTCC TTCGTCTGGA ATGTCACCAG GGTGAACGCG
ACTCCGGTGG TCACCACCCC TGCTACGCAG ATAAGCGCCC AGGGCGCGGC GGCAAGCCTG
CAGATAGTGG CCGGCGACGC AGACGGCGAC ACCCTCAGCT ACAGCGCCAC CGGTCTTCCA
GCGGGGCTTA GCATCAACGC CGCGAGCGGT CTCATCAACG GCACCGTTTT CTCCACAGCG
CTTCTCACCA ACAACGTCAT CGTCACCGTG AACGACGGCA CGGCCTCGGT TTCCGTCGGT
TTCGTCTGGA ATGTCACCAA GGTGAACCTG GCTCCGGCGG TAACCAACCC AGGTGCGCAG
ACCACCGCCC AGGGTGGGGC GGCGAGCCTT CAGGTCATAG CTACCGACGG CAACAACGAC
GTCCTCAGCT ACAGCGCCAC CGGGCTTCCG GCAGGGCTTA GCATCAACGC CTCGACCGGT
CTCATCAGCG GGATTGTTTC TTCCAGCGCA CTTCTCACCA ATAACGTCAC GGTAACCGTC
ACCGACGGCA CCGCTCCCGT TTCCATCAAC TTCACCTGGA GCGTCACCAG CGTGAACAAG
GCGCCGGTGG TGACCCCGCT CGATAACCAG TTCAACTTTC AGGGGGCGAC GGTAAGCGTT
CAGGTCTACG CCACAGATGC GAACGGCGAC ACCCTCAGCT ACGGCGCGAC CGGGCTGCCG
GAAGGGCTCA GCATCAACAG CGCGACCGGT CTCATCAGCG GTACGATCAC CTACGTCGCC
GTCGATACCC GCGTCACCGT TAACGTCACG GACGGTGTCG CGTCCGTCCC GACCAGCTTC
ACGTGGTATG TCACAAAGCT GAACAAGGCG CCGACCGTCA CCAACCCCGG CGCTCAGAGC
AGTACCCCGG GGGCAACTGT CAGCCTGCAG ATCGCGGCAA GCGACGTGAA CGGCGACACG
CTGAGCTACA GCGCCACCGG CCTTCCGGCC GGACTGACCA TGAACAGCGC CACCGGCCTT
ATCAGCGGCA CCGTTTCCTA CGCCGCTGCT CCCAGCAACA GCGTGACCGT GACTGTCACC
GACGGCACCG CTCCGGTTTC GGTCAGCTTC GTCTGGAGCG TTTCCGGCGG GCATGCGCCG
GTAGTGACCA ATCCCGGCAT ACAAGCGAGC ACCCGGGGGG CGGCAGCGAC TTTGCAGATC
GCGGCCAGCG ACGCCAACGG TGACGTCCTG AGTTACAGCG CCACCGGTCT TCCGGAAGGC
CTCAGCATCA ACTCCTCTAC CGGTCTCATC GGTGGCACCG TATCTTCCAC AGCACTTTCC
GCCAACAGCG TGACCGTCAC CGTGACCGAC GGCACGGCGT TGGTTTCGGT CTCCTTCGCC
TGGAACGTCA CCACGATAAA TGCCGCTCCG GTGGTCACCA CCCCAGTGAC GCAGAGTAGC
AGCCAAGGCG CGGCAGCAAG CCTGCAGATC GTGGCCAGCG ACGCCAACGG CGACATCCTC
AGCTACAGCG CCACCGGTCT TCCGACCGGG TTAAGCATCA ACAGCAGCAC CGGCCTCATC
AGCGGCACGG TTGCTTCCAC CGCCTCTCTC ACCAACAACG TCACTGTTAC CGTGTATGAC
GGCACCGTTT CGGTTTCGGC CAGCTTCGTC TGGAACGTCA CCAAGGTAAA CGTGCCGCCG
ATGGTAAATG CAATCGGCGC GCAGACCACC GCCCAGGGGG CGGCGGCGAG CCTTCAGGTC
ATAGCTATCG ACGGCAACAA CGACATCCTC AGCTACAGCG CCACCGGGCT CCCGGCCGGG
CTCATCATAA ACGGCTCGAC CGGTCTCATC AGCGGTGCAG TTTCTTCCAC AGCACTTCTC
ACCAACAACG TCACGGTGAC CGTCACCGAC GGCACAGCTT CCGCTTCGAC CGGCTTCACC
TGGAGTATCA CCAGGGTGAA CCAGGCGCCA GTGGTGACCC CGCTCGATAA CCAGTTCAAC
TATCAGGGGG CGACGGTAAG CGGCGTTCAG ATCTACGCCA CCGACGCGAA CGGCGACACA
CTCAGCTACA GCGCAACGGG GCTCCCGCCA AATCTCAGTA TCAACAGCGC GACCGGTCTT
ATCAGCGGCA CGCTGTCCTA CGCCGCCGCC GATACGCGCG TCACCGTGAC AGTCACAGAC
GGTGTCGCCT CCGTCCCGAT GAGCTTCATG TGGTATGTCG TCAGGGTGAA CAGGCCGCCG
GCCGTTACCA ACCCCGGTCC TCAGAGCAGC ACCTCGGGGG CAGCAGTCAC TCTGCAGATA
GTGGCAACTG ACCCGAACAC GGACACCCTC AGCTACAGCG CGACCGGTCT TCCGACCGGC
CTCAGCATGA ACAGCGCTAC CGGTCTTGTC AGTGGGACCG TTTCCTCCAC TGCGCTTGCA
AACAACAGCG TGACCGTAAC CGTCACCGAC GGGACGGCTC CCACCTCTGT CACCTTCACC
TGGAGCGTTA CCACTGTGAA TCAGGCGCCG GTTGTGACCG CCCCTGCTGC GCAGACCAGC
GCTCAGGGTG CGGCAGCCTC GCTGCAGATA GCGGCCACCG ACGCCAACGG CGACAGCCTA
AGCTACAGCG CCACCGGTCT TCCCGATGGG CTCAGCATCA ACAGCAGCAC CGGCCTCATC
AGCGGCACAG TTTCCTACGC CGCTGCTCTC ACCAACACCG TGACCGTGAC TGCAACCGAC
GGGACCGCTC CCGTTTCGGT CACCTTCACC TGGAGCGTCA CCAAGACGAA TCAAGCACCG
GTTCTGACCG CACCCGCTGC GCAGACAAGC GCTCAGGGTG CGGCAGCCTC GCTGCAGATC
GCGGCTAGCG ATGCCAACGG CGACAGCCTC AGCTACAGCG CCACCGGTCT TCCCGATGGG
CTCAGCATCA ACAGCAGCAC CGGCCTCATC AGCGGCACCG TTTCCTACGC CGCTGCTCTC
ACCAACACCG TGACCGTGAC TGCAACCGAC GGGACCGCTC CGGTTTCGAT CACCTTCACC
TGGAGCGTCA CCAAGACGAA TCAGGCTCCG GTTCTGACCA CCCCAGGTAA CCAGTCCGAC
TACACCGGGG ATGCGATCTC GCTGCCGATC ATTGCCACCG ATTCTAACGG CGATACCCTC
AGCTACTCCG CAAGCAACCT CCCGTTAGGG CTCAGCATCA ACAGCAGCAC GGGCGTCATC
AGTGGCACGA TTTCCAGCAG CGCGAATTCC AGCTATTCCG TGACCATTTC CGTCAGCGAC
GGTTCGCTCT CCACCTCCAT CAATTTCACC TGGAGCGTCA CCGGGCACAC GCTCACCATT
ACCTCCTCTC CCTCTAAGAC TGCCAGGGAG GACAGGACCT ATACTTACCA AGCGAGGGCG
ACGGATTCGC TAGGAAATCC GTTGACCTGG TCTCTCGTCA CCCCCCCCAG CGGGATGACC
ATCAGCTCCA CAGGGTACGT TAGCTGGAGA CCGAGCAATA AGGGGACTTA CCGTATCAAC
GTCAAGGTCT CCGACGGCAT CCTGTCCGCG ACTCAAAGCT ACGACCTGAT TGTCTATTAG
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| Protein sequence | MRRITIKALL TLCALMGALL WGGNSYADDT DGTSVWTIGN LDLGVIDVSE YDYNLYPNGA
TDWYISSAMW DPLYKQWFWY RVGTAEMQTS FNALPVTASY SADRTSVTAV YTAPEFVATV
VFTVPDKLDD SLNSTFVKSV SIQNSTAADL DLHLYSYNDF DLSGLDNVQI VDGSRAVQSD
LLGMTLVQTS SIKPSHYDID MTAFVLIDSL QNGTSPLILS DAAGPFTEGG DMQFALQYDL
MIPANYSASL VVTDKTYTTL PLDISYSQVG GACGSNGSNT TYQVCVGNPN AVDVNNVKVS
SVVTPAAGDL TGTLSFVGAT DGGTYDPATK SVNWTIPLLS AGAANLCYQA TVVTNLMEDF
SSRAKAYGDE TYPAQAEVIT PLCNYPPVVN STAVTKATVG MPYAYQITAT DRENDALSYT
LVQSPVGMTL DPVSNTLNWT PTIDQRDVYT PVQVDVSDGY SVVSHKFGVV AEVLNQPPTA
PATQSVTGLA TEPFFYMVQA SDPDRQVLNY STADLLPPGL SLGNTGLISG IPTVEGTTTV
NVKATDPGLA AAFTAVTITI GPAPIRPPTI APIPAAKVGA GSEFSYQVAA TDPQGQTLTY
GLSGNPPGMT IGSTGLISWP KTVVGTYTIT VNATNTSILS AATSFVLTVT NSAPVVTQVE
NQFNYQGAAV SLPIVATDIN GDTLSYSATG LPLGLSIDSA TGVISGTITY LAADTRATIT
VTDGALTSQM GFMWYVVKVN NPPTVTNPGA KTNTPGAAVT LQIKATDPNG DTLTYSATGL
PDGLSINSST GYISGTISYT ALTSNNVTVT VSDGTAPVSV NFLWSVTGGH APVVTNPGIQ
ISAQGEAASL QMVATDSNGD VLSYGATGLP AGLSINASTG LISGTVSSTA LLNNSVTVTV
TDGLAPVSVS FVWNVTRVNA TPVVTTPATQ ISAQGAAASL QIVAGDADGD TLSYSATGLP
AGLSINAASG LINGTVFSTA LLTNNVIVTV NDGTASVSVG FVWNVTKVNL APAVTNPGAQ
TTAQGGAASL QVIATDGNND VLSYSATGLP AGLSINASTG LISGIVSSSA LLTNNVTVTV
TDGTAPVSIN FTWSVTSVNK APVVTPLDNQ FNFQGATVSV QVYATDANGD TLSYGATGLP
EGLSINSATG LISGTITYVA VDTRVTVNVT DGVASVPTSF TWYVTKLNKA PTVTNPGAQS
STPGATVSLQ IAASDVNGDT LSYSATGLPA GLTMNSATGL ISGTVSYAAA PSNSVTVTVT
DGTAPVSVSF VWSVSGGHAP VVTNPGIQAS TRGAAATLQI AASDANGDVL SYSATGLPEG
LSINSSTGLI GGTVSSTALS ANSVTVTVTD GTALVSVSFA WNVTTINAAP VVTTPVTQSS
SQGAAASLQI VASDANGDIL SYSATGLPTG LSINSSTGLI SGTVASTASL TNNVTVTVYD
GTVSVSASFV WNVTKVNVPP MVNAIGAQTT AQGAAASLQV IAIDGNNDIL SYSATGLPAG
LIINGSTGLI SGAVSSTALL TNNVTVTVTD GTASASTGFT WSITRVNQAP VVTPLDNQFN
YQGATVSGVQ IYATDANGDT LSYSATGLPP NLSINSATGL ISGTLSYAAA DTRVTVTVTD
GVASVPMSFM WYVVRVNRPP AVTNPGPQSS TSGAAVTLQI VATDPNTDTL SYSATGLPTG
LSMNSATGLV SGTVSSTALA NNSVTVTVTD GTAPTSVTFT WSVTTVNQAP VVTAPAAQTS
AQGAAASLQI AATDANGDSL SYSATGLPDG LSINSSTGLI SGTVSYAAAL TNTVTVTATD
GTAPVSVTFT WSVTKTNQAP VLTAPAAQTS AQGAAASLQI AASDANGDSL SYSATGLPDG
LSINSSTGLI SGTVSYAAAL TNTVTVTATD GTAPVSITFT WSVTKTNQAP VLTTPGNQSD
YTGDAISLPI IATDSNGDTL SYSASNLPLG LSINSSTGVI SGTISSSANS SYSVTISVSD
GSLSTSINFT WSVTGHTLTI TSSPSKTARE DRTYTYQARA TDSLGNPLTW SLVTPPSGMT
ISSTGYVSWR PSNKGTYRIN VKVSDGILSA TQSYDLIVY
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