| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1169 |
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| Symbol | |
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| ID | 8136491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1358337 |
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| End bp | 1361804 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868780 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003020988 |
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| Protein GI | 253699799 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 4.34494e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTCAG CAAATTTCGT TCACCTTCAT CTCCACTCCC AGTATTCGCT CCTCGACGGG
GCGATCCGCA TCGGTGACCT CCTGAAGAAG GTGAAGGAGT GCCACATGCC GGCCGTGGCC
ATGACCGACC ACGGCAACAT GTTCGGCACC CTTGAGTTCT ATTTGAAGTG CAAGGACAAG
GGGATCAAAC CGATCATCGG CAGCGAGGTG TACATCGCGC CGCAGTCGCG CCTTCTTAAG
CAGGCGCCGG CCGCAGGCGA GGCGAACAGC TACCACCTGA TCCTCCTGTG CGAAAACATG
ACCGGCTTCA AGAACCTCTC CTACCTGGTT TCCGCCGGCT ACAAGGAAGG GTTCTACCGC
CGCCCCCGCA TCGACAAGGA ACTGCTGCTA AAGCACAAGG AAGGTCTCAT CGTCCTCTCC
GCCTGCCTGC AGGGCGAGGT CGCCTACCTT GCGGGCAGGA ACAAGATGGA CGAGGCGCGC
GCCGCGGCCT CCTGGTACGC CGAGAACTTC CCCGGGAGCT ACTACATAGA GCTGCAGGAA
AACAAGCTCC CCGAGCAGGA CGTCGCCAAT CGCAGGCTCA TGGAGATCGC GCGGGAAATG
GACCTGCCGC TCGTCGCCAC CAACGACTGC CATTACCTGA ACCGCGAGGA CGCGCGCGCC
CACGAGATCC TCCTCTGCAT CCAGACCGGC AAGACCATGA GCGATCCCAA CCGCATGGCG
TTCTCCGTTG ACGAGTTCTA CGTGAAGACT CCGGAGGAGA TGGCGGCGGC CTTTCATTAC
GCCCCGGAGG CGCTCAGCAA CACCGTCAAG ATCGCCGAGC GCTGCCACCT GGAATTCGAC
TTCAACACCT ACTACTTTCC CGCCTACGAG GCGCCGGAAG GGGAGACGCT GGACCAGCAA
CTTGAGCGGG AGTCCAAGGC GGGCCTCATC GAGCGGCTCA AGAAGATCCG CATCAAGTAC
AACCTCACCG AGGAGCAGGA ACAGGGCTAC CACGCCCGGC TGCGCATCGA GCTGGACTGC
ATCAAGCAGA TGGGGTTCCC GGGCTACTTC CTGATCGTCG CCGACTTCAT CAACTGGGCC
AAGGACCACG GCATCCCCGT CGGCCCCGGC AGGGGTTCCG CGGCGGGTTC TCTCGTCGCC
TTCTGCATCA GGATCACCGA CATCGATCCC ATGCCGTACA ACCTCCTCTT CGAGCGATTC
CTGAACCCGG AACGTATCTC CATGCCGGAT ATCGACGTCG ACTTCTGCCA GGATCGCCGC
GAAGAGGTGA TCCAGTACAT GGTCGAGAAG TACGGCCGGG AGAAGGTCTG CCAGATCATC
ACCTTCGGCA CCATGGCGGC GCGCGGCGTC ATCCGCGACG TGGGGCGCGC GCTCGATCTC
ACCTTCGGCG AGGTGGACCG GATCGCGAAG CTGGTCCCGG AGGTGCTCGG GATAACCCTT
GAGAAGGCGC TGGAGCAGGA GCCGAAGCTG AAGGAGCTGA TGGCGGCCGA CCCGAAGGTG
AAGGAGGTCA TGACCGTCGC GCTCAGGCTG GAGGGGCTCG CCCGCCACGC CTCGACGCAT
GCGGCCGGCC TCGTGGTCGC ACCACGCCAG ATGGAGGAAT TCTGCCCCGT CTACAAGGAC
CAGAAGACCG GCTCCTTGAC CACGCAGTAC TCCATGAAGT ACGTGGAGAA GATCGGCCTG
GTGAAGTTCG ACTTCCTGGG GCTCAAGAAC CTCACCGTCA TAGACAACGC CTGCAAGCAC
ATCAGAAACG GCAAGGACCC CAACTTCGAC ATCACCCTTT TGCGCGACGA CGACGCGGAG
TCCTACAAGC TCTTGCAGGC CGGCAACACG ACAGGCGTCT TCCAACTCGA GTCCAGCGGC
ATGAAGGAGC TCCTGGTCAA GCTGAAGCCC TCCTGCTTCG AGGACATCAT CGCGGTCTGC
GCCCTCTACC GTCCGGGTCC GCTCGGCAGC GGCATGGTCG ACGACTTCAT CGAAAGAAAG
CACGGCCGCA AGCAGACCGT TTACGACCTG CCGCAGCTTG AGCCGGTCCT GAAAGACACC
TACGGCGTCA TCGTCTACCA GGAACAGGTC ATGCAGATCT CCCGATCGCT CGCCGGCTAC
TCGCTTGGGG GCGCGGACCT TCTGCGCCGC GCCATGGGCA AGAAGGACGC CGAGCAGATG
GCGAAAGAGC GCGACAAGTT CCTGGAGGGG AGCGAGAAGC TGGGCCTCGA CGGGAAGAAG
TGCGCTGCCA TATTCGACCT GATGGCGAAA TTCGCCGAGT ACGGCTTCAA CAAGTCGCAC
TCGGCAGCCT ACGCGCTGGT CGCCTATCAG ACCGCATTCC TCAAGGCACA CTACCCGGTC
GAGTTCATGG CTGCCCTCTT GACCGAGGAC ATGGGTAACA CCGACAAGGT CATCAAGAGC
ATCGGCGACT GCCGCGAGAT GGGGATCGAG GTGCTCCCCC CCGACATCAA CGAGTCGGAC
CGCTCCTTCC GCGTGCTGGA CAAGGCGATG CGCTTTGGTC TGGGCGCGGT CAAGAACGTG
GGCGAAGGTG CCATCGAGGC GATCATCGAG GCGCGCGGCG ACGAGCCGTT CAAGGACCTC
TTCGATTTCT GCGAGCGCGT CGACCTGCGC CGGGTCAATA AAAGGGTGAT TGAGGCGCTC
ATCAAGTGCG GCGCCTTCGA CTGCACCGGC GCCAAGCGCT CGCAGCTCAT GGCGGGGCTG
GAGGATGCCG CGGCGACGGG GCAGAGGGTG CAGCAGGAGC GCGAGAGCGC GCAGGCGTCG
CTTTTCGGCG CCGCCGAGAT CGTGCGTGGC GGCAACGGCG GCGGCAACCG GCTTCCCGAC
ATCCCCGAGT GGGACGAGAA GTACCGGCTC GGCTGCGAGA AGGAGGCTAT CGGCTTCTTC
ATCACCGGGC ATCCGCTGGA CCGCTACGTC GCCGACATGA GGCGCTTTTC CACCGTGGAC
TGCTCCACCA TCCTGGACGC CAAGGAGAAG GGCGAGGTGA GGATCTGCGG CGTACCTAGC
ACAGTGAAGG AGCTGATCAC CAAGAAAGGG GACCGGATGG CCTTCCTCGC GCTGGAGGAC
CTGGTGGGCT CGGTCGAGGT GGTGGTCTTT CCGGAAACCT ACGCCAAGTG CTCCGAGGTG
TTAAGGGGGG ACGATCCCAT CCACGTCACC GGCACCGTCG AGCTGAGCGA GAAGGGGGCC
AAGGTGATGG CGAGCGACAT CATACTCTTG CGCGACCTGG TGGAGCGTGA AACGAGAAAG
GTCAATTTCA CCATAGACGC CAAAGAGGCC GACGAAGGGA AGCTCAAAAC GCTCAAGGAC
ATCATCTCCC GCTATCAGGG AATCTGTCGC AGCTTCCTGC ACCTTGACAT AGAGAACAGC
TCCAGAGTCA CCATCAAGCT TCCCGATGTA TACAAAGTCT CGGCAAGTGA AGAATTAACA
GTGGAAGTGA GCAACCTCTT CGGCTATAAT GCCGTGTCCT TCGAGTGA
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| Protein sequence | MDSANFVHLH LHSQYSLLDG AIRIGDLLKK VKECHMPAVA MTDHGNMFGT LEFYLKCKDK
GIKPIIGSEV YIAPQSRLLK QAPAAGEANS YHLILLCENM TGFKNLSYLV SAGYKEGFYR
RPRIDKELLL KHKEGLIVLS ACLQGEVAYL AGRNKMDEAR AAASWYAENF PGSYYIELQE
NKLPEQDVAN RRLMEIAREM DLPLVATNDC HYLNREDARA HEILLCIQTG KTMSDPNRMA
FSVDEFYVKT PEEMAAAFHY APEALSNTVK IAERCHLEFD FNTYYFPAYE APEGETLDQQ
LERESKAGLI ERLKKIRIKY NLTEEQEQGY HARLRIELDC IKQMGFPGYF LIVADFINWA
KDHGIPVGPG RGSAAGSLVA FCIRITDIDP MPYNLLFERF LNPERISMPD IDVDFCQDRR
EEVIQYMVEK YGREKVCQII TFGTMAARGV IRDVGRALDL TFGEVDRIAK LVPEVLGITL
EKALEQEPKL KELMAADPKV KEVMTVALRL EGLARHASTH AAGLVVAPRQ MEEFCPVYKD
QKTGSLTTQY SMKYVEKIGL VKFDFLGLKN LTVIDNACKH IRNGKDPNFD ITLLRDDDAE
SYKLLQAGNT TGVFQLESSG MKELLVKLKP SCFEDIIAVC ALYRPGPLGS GMVDDFIERK
HGRKQTVYDL PQLEPVLKDT YGVIVYQEQV MQISRSLAGY SLGGADLLRR AMGKKDAEQM
AKERDKFLEG SEKLGLDGKK CAAIFDLMAK FAEYGFNKSH SAAYALVAYQ TAFLKAHYPV
EFMAALLTED MGNTDKVIKS IGDCREMGIE VLPPDINESD RSFRVLDKAM RFGLGAVKNV
GEGAIEAIIE ARGDEPFKDL FDFCERVDLR RVNKRVIEAL IKCGAFDCTG AKRSQLMAGL
EDAAATGQRV QQERESAQAS LFGAAEIVRG GNGGGNRLPD IPEWDEKYRL GCEKEAIGFF
ITGHPLDRYV ADMRRFSTVD CSTILDAKEK GEVRICGVPS TVKELITKKG DRMAFLALED
LVGSVEVVVF PETYAKCSEV LRGDDPIHVT GTVELSEKGA KVMASDIILL RDLVERETRK
VNFTIDAKEA DEGKLKTLKD IISRYQGICR SFLHLDIENS SRVTIKLPDV YKVSASEELT
VEVSNLFGYN AVSFE
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