| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1118 |
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| Symbol | |
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| ID | 8136440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1309392 |
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| End bp | 1311236 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868729 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003020937 |
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| Protein GI | 253699748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 147 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATA CGAAAGAACT GGAATTCGCG GACATAGGCA CAGTCAACAG CCACGACCAC
ATCTGCCACA TCTACCATGG AGAGGGGGAG ATCTACCACC CGGTGCTCCC CTTTATCCAG
AAGGGGGTGG CCATAGGGGA GCGCTGCATC TATCTGCATG GGTCGGAGCA ACGGCTGGAG
CGGTTGCTGC AGAATGCGGT CTCCTCACAG CAGGACGACT CCGGCGCACT GATACTGTTC
CCGCTTGAGG ATTTCTGGCA CAAGGAGGGC GCGTTCAAGC AGGAACGGGT GCTGAAACTT
TTGCACAAAC TCTGCAGTGC CGCCATTGAC GACGGCTTTA GCGGCACCAG GGTCATCTGT
GACATGGGAT GGGCCGCCTT AGAGCCTAAG CGACAGGAAC TGCTGCAGCG TTTCGAAAGG
GAGTTGACCG CATTCGCTTC GCAAAACGAC GTGACGCTCC TTTGCCTGTA CAACCGCGAC
CTTTTCCCTC CCGAAATAAT ACTGGAGCTG GCGAAGCTGC ACCCGCAGGT GATCGTCGGC
GGCAGGACCT GCGGCAATCC TTTCTATTTC CCGGCAGCTT CGGACACTCG CATCAGGGCG
GCGCGCTGCG AACTGGACGT ATTTATGGCT ACCGCGCAGA GAATGACGGT GCTTTTGGCC
GAGAGCGACC GTCTCAAGCA GGAGCTGGAA CAGGCCTATG GCGCGCTGGC CCGGAAGATC
TATGAGAATT GGCAGGAGGA GGACTCGCTT AGGGCCAATG AGAAGGAGAT GCACGAGAAG
GACGAGGCTC TTTTGGAACA CAAGAGGAAA CTGCAGACCA TCCTGCAACA TATCCCGGCC
ATGCTTATGG CGTTCGACGG CGGCGACAGG CTTGCCGCCT GCAATCACGA GTTCGAACGG
GCCACGGGCT TCAGGGTGGA AGAGGTTATC GGCAAGCCCA TGCTGGAGCT GCTCCACGTG
GAAGGGGAGC TGCGCGAAGA GGTGGTCTCG GCGCACCCGC GGGAGGGGGG GGACTACCGG
GGGAGGGAGT GGAGCCTGCG CTGCAGAGAC GGCTCTGTGA AGACCGTCGC CTGGTCCAAT
ATCTCCCGCT ATGTCCCGAT CAGGGGGTGG AGCAACTGGG TCGTGGGACT GGACGTGTCG
GCCAAACTCC ATGCGGAGAA CGCTCTCAAG GGGCTGCGCG AAGAGTTGGA GGCGAGAAAC
GCCGAGCTGG AGGCGTTCGG CGAGGCGGTC TCCCACGATC TCAGCGCGCG GTTGGCCCGG
ATCAGCGAGG ACTGCCGCGA GATGCAAAAG CTCTACGGTG GCGACCTTTC GACCCCCTGC
CGCGAGATGC TGCAAAAGGT AAGCGTCGCG GCGCTGGAGC TGGCCGGCCC CATCGCCGCC
CTGCAGCGGC TGACCGCGCT GGCGGCTGCA GGCCTGCAGC CTGAAGAGGT GGACTTAAGC
GCCATGGCCT CGGAGATAGC CGAGAAGCTA TCGGATACGG TCACCCGGCC GGTCACCTTC
AGGATCGAGG ACGGGGTGAC TGTGACCGGC GACCGGGAGA TGCTCCGGTT GGCCATGGAA
CAGCTGCTGG AGAATGCCTT CAACTGCACC GTGGGCGTAA AGCACCCGGT GATCAAGTTC
GGTACCGCGC AGGTGAAGGG GGAGCGGAGC TTCTACGTTT CCGACAACGG CCCCAGACCC
GGCGAGCAAC CGGGCAAGGG GATAGTAGGC AAAGCAGAGG GGCAGGAGCG GATATCCAGC
GGCATCGGCC TTGCCACGGT ACAAAGGATC ATCAACCTGC ACCGCGGCCG GTTTTGGTGC
GCCGATCAAA CGGGCAGGGG AGGTACCCTT TACTTCCAGG TCTAG
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| Protein sequence | MEDTKELEFA DIGTVNSHDH ICHIYHGEGE IYHPVLPFIQ KGVAIGERCI YLHGSEQRLE
RLLQNAVSSQ QDDSGALILF PLEDFWHKEG AFKQERVLKL LHKLCSAAID DGFSGTRVIC
DMGWAALEPK RQELLQRFER ELTAFASQND VTLLCLYNRD LFPPEIILEL AKLHPQVIVG
GRTCGNPFYF PAASDTRIRA ARCELDVFMA TAQRMTVLLA ESDRLKQELE QAYGALARKI
YENWQEEDSL RANEKEMHEK DEALLEHKRK LQTILQHIPA MLMAFDGGDR LAACNHEFER
ATGFRVEEVI GKPMLELLHV EGELREEVVS AHPREGGDYR GREWSLRCRD GSVKTVAWSN
ISRYVPIRGW SNWVVGLDVS AKLHAENALK GLREELEARN AELEAFGEAV SHDLSARLAR
ISEDCREMQK LYGGDLSTPC REMLQKVSVA ALELAGPIAA LQRLTALAAA GLQPEEVDLS
AMASEIAEKL SDTVTRPVTF RIEDGVTVTG DREMLRLAME QLLENAFNCT VGVKHPVIKF
GTAQVKGERS FYVSDNGPRP GEQPGKGIVG KAEGQERISS GIGLATVQRI INLHRGRFWC
ADQTGRGGTL YFQV
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