Gene GM21_1116 details

Gene Information

• Locus tag: GM21_1116
• ID: 8136438
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1308076
• End bp: 1308780
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644868727
• Product: spermidine synthase-like protein
• Protein accession: YP_003020935
• Protein GI: 253699746
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0421] Spermidine synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 154
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCAGC CCTGGCAAGT ATTGCAAAGC GTAAAGACCG CCGACGGCGT GCTGGAACTG 
AGACAGCGCG GCGAGAGCGA TTTCCTGATC ACCGTGAACG GGCTGGTGCT GATGAACAGC 
TCGCTGCACC GCTCCGAGGT GGCGCTCGGG GAGCTCGCCT GCGGCCACCT GAAACAGCAG 
GAGGCGCCGC GGGTGCTGGT TGGGGGGCTG GGGATGGGGA TCACCCTGAG GGCGGTCCTG 
GACAACCTCC CGCCCAAGGC CACGGTCGTG GTGGCGGAGC TGAACCCGGT GGTGCTCGAT 
TGGTGCCGGG GACCGCTCTC TCCGGTGACG AACCAGGCTG CCGGCGACCC CAGGGTGACC 
GTGGAGATAA CCGACGTGGC CGACGCCATC AGGAAAAACG CCATGGCGAG GTCGCGTTTC 
GACGCCATCG TGCTCGACCT GTACACCGGG CCGCACGCGA AGACGCACAA GATCGAGGAT 
CCTCTCTACG GCGCCATCGC CATCGAGATG ACCCGTGCCG CGCTGAAGCC GGGCGGGGTC 
TTCGCCGTGT GGGGCGAGAA CTACGACCAG GGATTCGACA AGCGGCTGCG CGCCGCAGGC 
TTTTCCGTCA CCTGCGACCG CCCCGGCCGC GGGGGATTGC GCCACGTGGT CTACCTCGCG 
CGGGTGCAGC AGCGGTCGGA ACCGGGACGG CAGGGGAAGC GCTGA 

 

Protein sequence

MAQPWQVLQS VKTADGVLEL RQRGESDFLI TVNGLVLMNS SLHRSEVALG ELACGHLKQQ 
EAPRVLVGGL GMGITLRAVL DNLPPKATVV VAELNPVVLD WCRGPLSPVT NQAAGDPRVT 
VEITDVADAI RKNAMARSRF DAIVLDLYTG PHAKTHKIED PLYGAIAIEM TRAALKPGGV 
FAVWGENYDQ GFDKRLRAAG FSVTCDRPGR GGLRHVVYLA RVQQRSEPGR QGKR