| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1091 |
|---|
| Symbol | |
|---|
| ID | 8136413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1283117 |
|---|
| End bp | 1283632 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644868702 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003020910 |
|---|
| Protein GI | 253699721 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.00055725 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGATA ATAAGCAGAT ACCACGCTTG ATCATATCCA GAATGGAAAC GCCGGAGACG
CACCCCGACC AGCGAGGATT CAGCCTGATC GAACTGCTCA CAGCCGTAGC CATCATAGCC
ATCCTCGCGG CTATAGCCCT ACCTGCCTAT TCCGACTATG CCTACAAGGC GCGCGTAGCT
CGCTGCAAAG CAGAAATCAT GACACTGCAA GCATCGATAG CTGCGTACAA AGTCTTCAAC
AACCGCCAAC CGGATACGCT GGCACATGTG GGTTACGGCG ACCTCCTGGA CCCTTGGGGA
CATCCTTATC AATACCTGAA CATCGCAGAC GGCTCCGTAA ATGGTAAAGG GAGTTTCCGG
AAGGACCGCT TCCTTAACCC CCTCAACTCT GATTTCGACC TCTACAGCAT GGGTGCGGAC
GGCTTGAGCC AAACCCCGCT AAGCGCCGCG GTGAGCCATG ACGACATCAT TCGTGCCAGC
AATGGCGGCT TTATCGGGCT GGCATCCGAT TTCTAG
|
|---|
| Protein sequence | MLDNKQIPRL IISRMETPET HPDQRGFSLI ELLTAVAIIA ILAAIALPAY SDYAYKARVA
RCKAEIMTLQ ASIAAYKVFN NRQPDTLAHV GYGDLLDPWG HPYQYLNIAD GSVNGKGSFR
KDRFLNPLNS DFDLYSMGAD GLSQTPLSAA VSHDDIIRAS NGGFIGLASD F
|
|---|
| |