| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1087 |
|---|
| Symbol | |
|---|
| ID | 8136409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1273686 |
|---|
| End bp | 1275479 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868698 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_003020906 |
|---|
| Protein GI | 253699717 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0000000000374236 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCTGACAC TGATAAAGGT CCGCCCGATG CCCAAACGGT TTCCTCCATA CCTAGCTCTT
ATCTGCCTCG CGGCGCTGCT TCTGCGCGCG CCTGCCGCCT TCGCGGCCGA TCCGGTCGAG
ATCGCGGTGA CGGGTGTGGA AGGCGATCCC CTGGAGAACG TGAGGCAGGC GCTGGCGCTT
CCCTACGGCC TGGTCCGGGA GGGGAAAGTG GACCGGCTCT GGCTGGACCG CTTCGCCAAA
AAGGCGCCGG ACAAGGTACG TCAGGCGCTT GAGCCTTACG GTTACTACAA GTCGGAGGTT
TCGGCCCGGG TGGCTCGGAC ACGGGACGGC AAACCGAGCC TGCAGGTCGT CGTCATCCCG
GGAGAACCGG TGCTGGTCAC CGAGGTGACG GTGGAGTTGA AGGGGGCGGG AGCTAAGGCG
AGAAGGCTTT CGCGGGTGCG GGACGCCTTT CCGGTGAGGA GGGGGGAGGT GCTGCTGCAA
CCGGATTACG AGCGGGGCAA GGGGGCGCTG CAGTCGCAGG CCCGGAAGCT TGGCTACCTC
GACGCCTCCT TCCCCCGCCA CGAGATCCGC ATCAGTGAAG ACCGCACGAA AGCCAGGATC
GCCCTGGTGC TGGACACCGG CCCCCGTTTC TATTTCGGCC CGGCGGTCAT TCAGGGAGCG
CCCGATTACC CCGAGTCCTA CCTGAAGCGG TTCGTCGCCT TCAAGGAAGG GGAACCTTTT
TCCTACGCGA AGATCGGGGA GACGCAGCTC AATTTCGCCA ACTCCGAGCG CTTCAGGCAG
GTGGTGGTCA CGCCGGAGCG CGAGCGGGCC GAGAACGCCC GGGTACCGGT CGTGGTGCAG
CTTACCGAGG CCCCGCGCCG CACGGTAAGG CCCGGGATCG GCTACGGGAC CGACACCGGC
GCCAGGTTCT CCACCCACTA CCGGGACTTG AACCTCTTCC ACAAAGGGCA CGACCTCGAC
TTGAGCCTCT ACGCGGCGCA ACGCCTGCAG GGATTCGCCG GGCGCTACAC CATTCCGAGC
AGCAGCGATT ACCGAAGTTC CACCGCCTTG CAATTGAACC TGCAAAAGGA AGACGTCACC
AATTACTTGA GCAAGATCGT CGCTTTGGAG CTGGACCGAA ACATTGGCCT TGGGCGCGGC
GAGCTGGCGA CGGCGTACGT GAGGCTGCTG CAGGAGGTCT TCACCATCGG CGACGAGAAC
GCGAACTCCA GGCTGGTGCT TCCTGGATTC CGCTTCTCCA AGGAAACCTT CAACAACATG
GTCCGCCCCA GGCGCGGTTA CGCCTACACC TTGGAGCTGC GCGGCGCTCA CCCGTATCTG
GGATCCGACA CCGGCCTCAT CCAGGGGATC GCCCATGCCA ACCTGCTGTT CCCGCTACCC
TGGCGCCTCT CCCTGCAAAG CCGGGGGGAC GCGGCGTACA GCCTGCTCGA TGACCCCTTC
TCGGAACTTC CCCCCTCCAT CCGCTTCTTT GCCGGCGGCG ACCAGAGCGT GCGCGGCTAT
TCCTACCAGA GCTTGGGCCC CAGCGACTCC TCCGGGAAGG TGGTGGGGGG GAGGCACCTG
CTGGTGGGGA GCCTGGAGCT TTTGCGCGCC CTCTACAAGG ACTGGGGGGT GTCGGTCTTC
TACGACATAG GGAACGCCTT CAACAACTAC GCGGACATGC GCCTGAAAGA CGGGACCGGC
GTGGGCATCC ATTACTACAC CGCGGTCGGG GGGCTGAACC TCTACCTCGC CAAGCCGCTT
GCCACCGGTG CGGGGAGCTA TCGCATCCAT TTCACCGTGG GGTTCCAGCT ATGA
|
|---|
| Protein sequence | MLTLIKVRPM PKRFPPYLAL ICLAALLLRA PAAFAADPVE IAVTGVEGDP LENVRQALAL
PYGLVREGKV DRLWLDRFAK KAPDKVRQAL EPYGYYKSEV SARVARTRDG KPSLQVVVIP
GEPVLVTEVT VELKGAGAKA RRLSRVRDAF PVRRGEVLLQ PDYERGKGAL QSQARKLGYL
DASFPRHEIR ISEDRTKARI ALVLDTGPRF YFGPAVIQGA PDYPESYLKR FVAFKEGEPF
SYAKIGETQL NFANSERFRQ VVVTPERERA ENARVPVVVQ LTEAPRRTVR PGIGYGTDTG
ARFSTHYRDL NLFHKGHDLD LSLYAAQRLQ GFAGRYTIPS SSDYRSSTAL QLNLQKEDVT
NYLSKIVALE LDRNIGLGRG ELATAYVRLL QEVFTIGDEN ANSRLVLPGF RFSKETFNNM
VRPRRGYAYT LELRGAHPYL GSDTGLIQGI AHANLLFPLP WRLSLQSRGD AAYSLLDDPF
SELPPSIRFF AGGDQSVRGY SYQSLGPSDS SGKVVGGRHL LVGSLELLRA LYKDWGVSVF
YDIGNAFNNY ADMRLKDGTG VGIHYYTAVG GLNLYLAKPL ATGAGSYRIH FTVGFQL
|
|---|
| |