Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1075 |
Symbol | |
ID | 8136397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1260296 |
End bp | 1262785 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644868686 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003020894 |
Protein GI | 253699705 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 2.46099e-33 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCAAAAG AGAGCAAAAA CGAAAACGAA CCTGTCAAAG GCTCGGATCT GGCGCGGGTG TGGAGCGCGG CGTTACTTGC TTTCCTGGTG GGGACGCTGG TCAGCGCCGG CACCATCTGG CGCTACGAGA CCAACCGCAT AGAAAGCAAA CGCCGCGCCG TCACCGACCT GAGCCAGAAG GTGGCCCAGG ATATCCAGAA CAACCTGAAC CTCTCGCTTT CCTCCACCTA CGCACTCGCC GCCGTCATCC GCCAAGGCCA CGGCAAGATC GAGAATTTCC CCAAACTGGC CCGGGAGATG CTGGAGCTCT ACCACGGCAT CAGCTGCCTC CAGCTCGCCC CAGACGGCAT CATCAGGCAG GCGGTCCCGC TCGCCGGCAA CGAAAAGGCC ATCGGGCACA ACCTGCTGGA GGACAACAAG CGCAACAAGG AGGCGATACT TGCCCTGCGC ACCAAGTCCC TCACCCTTGC CGGACCCTTT AAGCTGATCC AAGGGGGACA GGCTGCCATA GGACGGCTTC CGGTCCTGAT CAGGGATGAC GACAACGGGA CGGAAAGGTT CTGGGGATTC AGCATCGCTG TCCTGCGCAC CGCCGACTTC TTCAAGAACA CCAACCTCGC TCCCATCCTG CAGGGAACCT TCCATTACCA GATCTCCCGC ATTCACCCTG ACACCGGCAA GAGGGACGTC TTCTGGTCGG AGGGGGGGGC GTTGCAGGAC CCGGTCAGCC GGAAGATACA GGTTCCAAAC GGTGAGTGGA CGCTCTCGGT GGCGCCGGTC GAGGGATGGT ACTCGACGCG GGGCGTGGTC GCCGAAGCTG TCCTGGCCCT CTTCATCGGC GCCCTGTCGG GGCTCGCCGC GTGGTGGCTG GCGCGCCAGC CGGTCGTTCT GCAGCGCATG GTGGAGGAGC GGACTCGGGA ACTTTCGGAG AGCCACGCCC GGCTGGAGCG TGAGATTGCC GAGCGTGAAA ACGCAGAGGA AGCTTTGCAG GCGTCGGAGC TGAAGCTGCG CAGCATCTTC GCCTCGCTCA CCGACGTCAT CCTCATAGTC GATGCCGATG GGCGCTGCCT CGAAGTCGCC CCTACCCACA CCAACCGTCT CTACCTCCCT TCCGAAAAAC TCCTGGGGCG GACCTTCCAC GACATATTCC CCTCCGGCCA GGCCGACCTC TTCCTCGCCG CCATCGGCAA GACCCTTGCC ACCGGCGGTA TCACCTCGGT GGATTACCAG CTGGACATAG ACGGCGAGCA GGTCTGGTTC ACCGGCAACG TGAGCCCCAT GTCGGAAAAA CTGGTGGTCT GGTCCGCCCG CGACATAACC CAAAGAAAGC AGGCCGAGGA GGAGCGCCTG AAACTGGAAA AGCAGATGCT CCATACCCAG AAGCTGGAAA GTCTCGGGGT GCTGGCAGGG GGGATAGCGC ACGACTTCAA CAACATCCTC ACCGTGATAG TAGGCAATGC CGACCTGGCG CTCACGAAGC TTCCACCCGA CTCCCCGGCG GCAGAGAACC TGCTGCGGGT TGAGACGGCG GCGGCCAGGG CCTCGGAGCT GGCCAGGCAG ATGCTGGATT ATTCCGGGAA AGGGCGCTTC GTGGTCGAGG CGTTGGACCT GAACGAATTG GTTGAGGATA TGGGGCAGAT GCTGGAGGTC TCCATCTCGA AAAAAGCGCA GCTCCGTTAC AACTGCCACC GGCCGCTGCC GGAGTTCAAG GGAGACGCCA CCCAGATCCG GCAGATACTC ATGAACCTCG TGATCAACGC CTCCGAGGCG ATCGGTGACC AAAGCGGCGT CATCTCCATC AGCACCGGGT GCGTCGAGTG CAACGACGAC TATTTCAAGA GCTCCTGGCT ATCCGATCAT TTGCAGCAAG GTCCCTACGT CTATCTTGAG GTCGGCGACA ACGGCTGCGG CATGGACAAG GAGACCGTGG CCAAGATCTT CGATCCCTTC TTCACCACCA AGTTCACCGG CCGGGGCCTC GGGATGGCGG CGGTCCTCGG CATAGTGCGC GGACACCAGG GGGCGATCAA GGTCTACAGT GAGCCCGGCA AGGGGACCAC CTTCAAACTC CTCTTTCCCG CAGCGGCGCT GCCGGCAAAG CAAAGCTCCG AAGAGCAAGA GGATTCTCTG CCGTGGCAGG GGAGCGGCAC TGTCCTTTTG GTGGACGACG AAGAAACCAT CCTTGAATTG GGGCGCGAGA TGTTGAAGGA GTTGGGTTTC GAGGTGGTCA CCGCCGGCGA CGGATGGGAG GCGGTCGAGG TGTTCCAAAG CCGCGACGAC ATCTCGCTGG TCATTTTGGA CCTGACCATG CCGCGCCTGG ACGGCGAGGA GTGTTTCCGG GCCCTGCGCC GACTGGACCC GCAACTGAAG GTGGTGATGT CTAGCGGGTT CACCCAGCAG GAGGTAACCG ATAAGTTGGA TGGCATCGCC GGCTTCATCC AGAAGCCGTA CAAGCTCTCC ACCCTGCGGG AGTTGCTGAG GAGCTTGTAG
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Protein sequence | MPKESKNENE PVKGSDLARV WSAALLAFLV GTLVSAGTIW RYETNRIESK RRAVTDLSQK VAQDIQNNLN LSLSSTYALA AVIRQGHGKI ENFPKLAREM LELYHGISCL QLAPDGIIRQ AVPLAGNEKA IGHNLLEDNK RNKEAILALR TKSLTLAGPF KLIQGGQAAI GRLPVLIRDD DNGTERFWGF SIAVLRTADF FKNTNLAPIL QGTFHYQISR IHPDTGKRDV FWSEGGALQD PVSRKIQVPN GEWTLSVAPV EGWYSTRGVV AEAVLALFIG ALSGLAAWWL ARQPVVLQRM VEERTRELSE SHARLEREIA ERENAEEALQ ASELKLRSIF ASLTDVILIV DADGRCLEVA PTHTNRLYLP SEKLLGRTFH DIFPSGQADL FLAAIGKTLA TGGITSVDYQ LDIDGEQVWF TGNVSPMSEK LVVWSARDIT QRKQAEEERL KLEKQMLHTQ KLESLGVLAG GIAHDFNNIL TVIVGNADLA LTKLPPDSPA AENLLRVETA AARASELARQ MLDYSGKGRF VVEALDLNEL VEDMGQMLEV SISKKAQLRY NCHRPLPEFK GDATQIRQIL MNLVINASEA IGDQSGVISI STGCVECNDD YFKSSWLSDH LQQGPYVYLE VGDNGCGMDK ETVAKIFDPF FTTKFTGRGL GMAAVLGIVR GHQGAIKVYS EPGKGTTFKL LFPAAALPAK QSSEEQEDSL PWQGSGTVLL VDDEETILEL GREMLKELGF EVVTAGDGWE AVEVFQSRDD ISLVILDLTM PRLDGEECFR ALRRLDPQLK VVMSSGFTQQ EVTDKLDGIA GFIQKPYKLS TLRELLRSL
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