Gene GM21_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1075 
Symbol 
ID8136397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1260296 
End bp1262785 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content62% 
IMG OID644868686 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003020894 
Protein GI253699705 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.46099e-33 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAAAAG AGAGCAAAAA CGAAAACGAA CCTGTCAAAG GCTCGGATCT GGCGCGGGTG 
TGGAGCGCGG CGTTACTTGC TTTCCTGGTG GGGACGCTGG TCAGCGCCGG CACCATCTGG
CGCTACGAGA CCAACCGCAT AGAAAGCAAA CGCCGCGCCG TCACCGACCT GAGCCAGAAG
GTGGCCCAGG ATATCCAGAA CAACCTGAAC CTCTCGCTTT CCTCCACCTA CGCACTCGCC
GCCGTCATCC GCCAAGGCCA CGGCAAGATC GAGAATTTCC CCAAACTGGC CCGGGAGATG
CTGGAGCTCT ACCACGGCAT CAGCTGCCTC CAGCTCGCCC CAGACGGCAT CATCAGGCAG
GCGGTCCCGC TCGCCGGCAA CGAAAAGGCC ATCGGGCACA ACCTGCTGGA GGACAACAAG
CGCAACAAGG AGGCGATACT TGCCCTGCGC ACCAAGTCCC TCACCCTTGC CGGACCCTTT
AAGCTGATCC AAGGGGGACA GGCTGCCATA GGACGGCTTC CGGTCCTGAT CAGGGATGAC
GACAACGGGA CGGAAAGGTT CTGGGGATTC AGCATCGCTG TCCTGCGCAC CGCCGACTTC
TTCAAGAACA CCAACCTCGC TCCCATCCTG CAGGGAACCT TCCATTACCA GATCTCCCGC
ATTCACCCTG ACACCGGCAA GAGGGACGTC TTCTGGTCGG AGGGGGGGGC GTTGCAGGAC
CCGGTCAGCC GGAAGATACA GGTTCCAAAC GGTGAGTGGA CGCTCTCGGT GGCGCCGGTC
GAGGGATGGT ACTCGACGCG GGGCGTGGTC GCCGAAGCTG TCCTGGCCCT CTTCATCGGC
GCCCTGTCGG GGCTCGCCGC GTGGTGGCTG GCGCGCCAGC CGGTCGTTCT GCAGCGCATG
GTGGAGGAGC GGACTCGGGA ACTTTCGGAG AGCCACGCCC GGCTGGAGCG TGAGATTGCC
GAGCGTGAAA ACGCAGAGGA AGCTTTGCAG GCGTCGGAGC TGAAGCTGCG CAGCATCTTC
GCCTCGCTCA CCGACGTCAT CCTCATAGTC GATGCCGATG GGCGCTGCCT CGAAGTCGCC
CCTACCCACA CCAACCGTCT CTACCTCCCT TCCGAAAAAC TCCTGGGGCG GACCTTCCAC
GACATATTCC CCTCCGGCCA GGCCGACCTC TTCCTCGCCG CCATCGGCAA GACCCTTGCC
ACCGGCGGTA TCACCTCGGT GGATTACCAG CTGGACATAG ACGGCGAGCA GGTCTGGTTC
ACCGGCAACG TGAGCCCCAT GTCGGAAAAA CTGGTGGTCT GGTCCGCCCG CGACATAACC
CAAAGAAAGC AGGCCGAGGA GGAGCGCCTG AAACTGGAAA AGCAGATGCT CCATACCCAG
AAGCTGGAAA GTCTCGGGGT GCTGGCAGGG GGGATAGCGC ACGACTTCAA CAACATCCTC
ACCGTGATAG TAGGCAATGC CGACCTGGCG CTCACGAAGC TTCCACCCGA CTCCCCGGCG
GCAGAGAACC TGCTGCGGGT TGAGACGGCG GCGGCCAGGG CCTCGGAGCT GGCCAGGCAG
ATGCTGGATT ATTCCGGGAA AGGGCGCTTC GTGGTCGAGG CGTTGGACCT GAACGAATTG
GTTGAGGATA TGGGGCAGAT GCTGGAGGTC TCCATCTCGA AAAAAGCGCA GCTCCGTTAC
AACTGCCACC GGCCGCTGCC GGAGTTCAAG GGAGACGCCA CCCAGATCCG GCAGATACTC
ATGAACCTCG TGATCAACGC CTCCGAGGCG ATCGGTGACC AAAGCGGCGT CATCTCCATC
AGCACCGGGT GCGTCGAGTG CAACGACGAC TATTTCAAGA GCTCCTGGCT ATCCGATCAT
TTGCAGCAAG GTCCCTACGT CTATCTTGAG GTCGGCGACA ACGGCTGCGG CATGGACAAG
GAGACCGTGG CCAAGATCTT CGATCCCTTC TTCACCACCA AGTTCACCGG CCGGGGCCTC
GGGATGGCGG CGGTCCTCGG CATAGTGCGC GGACACCAGG GGGCGATCAA GGTCTACAGT
GAGCCCGGCA AGGGGACCAC CTTCAAACTC CTCTTTCCCG CAGCGGCGCT GCCGGCAAAG
CAAAGCTCCG AAGAGCAAGA GGATTCTCTG CCGTGGCAGG GGAGCGGCAC TGTCCTTTTG
GTGGACGACG AAGAAACCAT CCTTGAATTG GGGCGCGAGA TGTTGAAGGA GTTGGGTTTC
GAGGTGGTCA CCGCCGGCGA CGGATGGGAG GCGGTCGAGG TGTTCCAAAG CCGCGACGAC
ATCTCGCTGG TCATTTTGGA CCTGACCATG CCGCGCCTGG ACGGCGAGGA GTGTTTCCGG
GCCCTGCGCC GACTGGACCC GCAACTGAAG GTGGTGATGT CTAGCGGGTT CACCCAGCAG
GAGGTAACCG ATAAGTTGGA TGGCATCGCC GGCTTCATCC AGAAGCCGTA CAAGCTCTCC
ACCCTGCGGG AGTTGCTGAG GAGCTTGTAG
 
Protein sequence
MPKESKNENE PVKGSDLARV WSAALLAFLV GTLVSAGTIW RYETNRIESK RRAVTDLSQK 
VAQDIQNNLN LSLSSTYALA AVIRQGHGKI ENFPKLAREM LELYHGISCL QLAPDGIIRQ
AVPLAGNEKA IGHNLLEDNK RNKEAILALR TKSLTLAGPF KLIQGGQAAI GRLPVLIRDD
DNGTERFWGF SIAVLRTADF FKNTNLAPIL QGTFHYQISR IHPDTGKRDV FWSEGGALQD
PVSRKIQVPN GEWTLSVAPV EGWYSTRGVV AEAVLALFIG ALSGLAAWWL ARQPVVLQRM
VEERTRELSE SHARLEREIA ERENAEEALQ ASELKLRSIF ASLTDVILIV DADGRCLEVA
PTHTNRLYLP SEKLLGRTFH DIFPSGQADL FLAAIGKTLA TGGITSVDYQ LDIDGEQVWF
TGNVSPMSEK LVVWSARDIT QRKQAEEERL KLEKQMLHTQ KLESLGVLAG GIAHDFNNIL
TVIVGNADLA LTKLPPDSPA AENLLRVETA AARASELARQ MLDYSGKGRF VVEALDLNEL
VEDMGQMLEV SISKKAQLRY NCHRPLPEFK GDATQIRQIL MNLVINASEA IGDQSGVISI
STGCVECNDD YFKSSWLSDH LQQGPYVYLE VGDNGCGMDK ETVAKIFDPF FTTKFTGRGL
GMAAVLGIVR GHQGAIKVYS EPGKGTTFKL LFPAAALPAK QSSEEQEDSL PWQGSGTVLL
VDDEETILEL GREMLKELGF EVVTAGDGWE AVEVFQSRDD ISLVILDLTM PRLDGEECFR
ALRRLDPQLK VVMSSGFTQQ EVTDKLDGIA GFIQKPYKLS TLRELLRSL