Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1059 |
Symbol | |
ID | 8136381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1240946 |
End bp | 1241623 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644868670 |
Product | thymidylate kinase |
Protein accession | YP_003020878 |
Protein GI | 253699689 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 2.34393e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCTTTT TCATTACATT TGAAGGTATA GAAGGGTGCG GCAAGACCAC CCAGCTTAGG CTTTTGAAGG AGCGCCTTGT CGCGCTGGGC GAAAAGGTGA CCGTGACCCG GGAGCCCGGA GGGTGCCCGG TCGCCGACCA GATGCGCGCC ATCCTGCTGG ATGCGAAAAA CAGCGCCATC ACCCCCTTGG CGGAACTCCT TTTGTACGCC GCGGCCCGGG CGCAGCACGT GCAGGAAGTC ATAGTCCCCG CGCTTGAGCG TGGCGAGACG GTCCTTTGCG ACCGCTTTAC CGACGCGACC GTCGCCTACC AGGGGCACGG CAGGGGCCTC GACCTGTCCG TCATCGAAGA ACTCAACACC CTTGCCACCG GAAGGGTGCA GCCGGCCCTC ACCGTGCTGA TCGACTGCCC GGTGGAAGTG GGCCTTTCCC GCGCCCTGGC CCGGATCGAG GCGACCAGCG GGGCCAAGGA GGAACGTTTC GAGCGCGAGT CCCTGCTCTT CCACCAAAAG GTGCGCGACG GCTACCTGGC GCTGGCGGCC GCTTTCCCGG AACGCTTCGT GGTTGTCGAC GGCTCGGGAG ATGTGCAGCA GACCGGGCTG CTCGTCGAAG AGGCCCTTCG CCGGCGGATG CAGAGCCTTG GCAAGGCCGG ACTCACAGAA GTCAAGGCAG GGTGCTAG
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Protein sequence | MGFFITFEGI EGCGKTTQLR LLKERLVALG EKVTVTREPG GCPVADQMRA ILLDAKNSAI TPLAELLLYA AARAQHVQEV IVPALERGET VLCDRFTDAT VAYQGHGRGL DLSVIEELNT LATGRVQPAL TVLIDCPVEV GLSRALARIE ATSGAKEERF ERESLLFHQK VRDGYLALAA AFPERFVVVD GSGDVQQTGL LVEEALRRRM QSLGKAGLTE VKAGC
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