| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1057 |
|---|
| Symbol | |
|---|
| ID | 8136379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1238883 |
|---|
| End bp | 1239821 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644868668 |
|---|
| Product | PSP1 domain protein |
|---|
| Protein accession | YP_003020876 |
|---|
| Protein GI | 253699687 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0000000000000216958 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGCAAAGA TCGCAAGGAT ACAATTCAAC ACCGCAGGCA AGCTCTACGA CTTCACCCTT
GGCAAGACCA CGGTCAAGCC GGGCGACCGG GTCATCGTCG AGACCGAGCG CGGCAAGAGC
ATAGGGCAGG TCGTGGCCGG CCCCATCGAA GTGGACGACG CGCTGGTCCC GGAAGGAATC
AAGCCGGTTC AACGCCTGGC GGAGGCCAGT GACCTGGCGA CGCTGGCGAC CAACACGGCA
AAAGAGAAAG AGGCGCACAA GTTCTGCCTG ACCCGGATCA AGGAGAGGGG CATGGACATG
AAGCTCGTGC GGGTCGAGTA CCTCTTCGAC GGGAGCAAGG CGATCTTCTA CTTCACCGCC
GACGGCCGGG TCGATTTCCG CGAACTGGTC AAGGACCTGG CGCATGCCTT CCACACCAGG
ATAGAGATGC GCCAGATCGG CGTCAGGGAC GAGTCCAAGA TGGTCGGCGG TATCGGGATC
TGCGGGCGCG AGCTCTGCTG CTCCTCCTAC CTGCGCGAGT TCGAGCCGGT CTCGGTGAAG
ATGGCCAAGG AGCAGAACCT GGCGCTCAAC CCGAGCAAGA TCTCCGGGCA GTGCGGCAGG
CTCCTTTGCT GCCTCTCCTA CGAGTTCGAC ACCTACTGCA GCTTGAGAAA GGGGCTCCCC
AAGTGCGGCA AAAGGGTCCA GTGCGGCTGC GTCGACGGCG AGGTGGTGAA GGTGAACGTG
CTGCAGCAGA CCGTGACCGT GAGAAACGTA GACGACACGA TGGTGACGCT GAACGGCGAC
GAGATCAGCC CCGAGAACGT GAGCGACCGG GTCAAGAAAC CGCAGGGCAA GGGAGAGCAG
CAGCAGGGCG ACAAGGGCAA AGGCCCACAG GGCGCCGGCA AGCAGCGCCG CAACAGGCCC
CAGGACGTTA AGGAAAGAAA AAAGGAGAAA CCACAATGA
|
|---|
| Protein sequence | MAKIARIQFN TAGKLYDFTL GKTTVKPGDR VIVETERGKS IGQVVAGPIE VDDALVPEGI
KPVQRLAEAS DLATLATNTA KEKEAHKFCL TRIKERGMDM KLVRVEYLFD GSKAIFYFTA
DGRVDFRELV KDLAHAFHTR IEMRQIGVRD ESKMVGGIGI CGRELCCSSY LREFEPVSVK
MAKEQNLALN PSKISGQCGR LLCCLSYEFD TYCSLRKGLP KCGKRVQCGC VDGEVVKVNV
LQQTVTVRNV DDTMVTLNGD EISPENVSDR VKKPQGKGEQ QQGDKGKGPQ GAGKQRRNRP
QDVKERKKEK PQ
|
|---|
| |