| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1038 |
|---|
| Symbol | |
|---|
| ID | 8136360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1220608 |
|---|
| End bp | 1222014 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644868649 |
|---|
| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003020857 |
|---|
| Protein GI | 253699668 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAA CGCCGTATCC CAGCTTCAGC ATATTGCTGG TCGACGACGA GCCGGCCTGG
CTCAAGTCCT TCTCGCTCAC CTTGAAGAGC CGGGCGGGGA TCAACAACGT GCTCATCTGC
CAGGACAGCC GCGAGGCGAT GGGGCTCTTG GACCGGGGGG GAGTGGGGCT CGTGCTCCTC
GACCTGACCA TGCCGCATAT CTCCGGCGAG ACGCTTTTGC AGCAGATCGC TGAGAGCCAC
CCGGAGATCA TGACCATCAT CGTGAGCGGG ATGAACCAGC TCGACACCGC GGTGCGCTGC
ATGAAGCTCG GAGCCTTCGA CTACATCGTG AAGACCGACG AGGAGGACCG GCTGGTCGGG
GGGGCGATGC GGGCGATCAG GATGCTGGAG CTGCACCAGG AGTTCCGTGC CATGAGCGAC
CGGATGATCT CGCGCGAGCT GAAGCACCCG GAGGCGTTCG CCGACATCGT CACCAGCGAC
CGCGGCATGC ACGACCTTTT CAACTACGTG GAGGCGGTGT CGCCCAGCCA TCAGCCGCTT
TTGATCACCG GCGAGAGTGG CGTTGGAAAG GAGCTGATCG CCCGCGCCGT GCATGCCTTG
AGCGGCTGCC AGGGGCCGCT GGTCGCCGTC AACGTAGCCG GGCTCGACGA TACCGTCTTT
GCCGACACTC TTTTCGGGCA CGTGCGCGGC GCCTATACCG GCGCGGACCA GGCGCGCCCC
GGGATGATCG AGCAGGCCGG AAACGGAACG CTTTTCCTCG ACGAGATCGG GGACCTGAGC
ATCGCCTCGC AGGTGAAGCT ATTGCGCCTG CTGCAGGAAG GAGAGTATTT CCAGCTGGGG
AGCGACCGGC CCAAGCGGAT GAACGCGCGC ATCGTGGTCG CGACGCACCG GGATCTGGCC
GCCAAGGAGG CCGCCGGGAC TTTCAGGCGC GACCTTTATT ACCGTCTTTG CACGCACCGC
ATCCAGATTC CGCCGCTCAG GGAGCGGACC TCCGACATCC CGCTTTTGCT CGACTATTTC
CTTGAGCAGG CGGCGCAGTC GCTGGGGAAG AAGAAGCCGA CCCCCCCAAA GGAGTTGGCC
CAGATACTCG CCACCTACAG CTTCCCCGGC AACGTGCGCG AATTGCGCGG CATGGTCTAC
AACGCGGTCA GTCTGCACAA GGAGAGGATC CTTTCCATGG ACAGCTTCCT GAAGGCGATC
GGCCGCTCCC GCGTGGAGCA GCCGCTTCCT GCCCTGCACG AAAACCCGTT CCAGTCCTTC
GAGCGCCTGC CCACCTTCGC CGAGGCGGCC GAACTGCTGG TGGAGGAGGC GGTCTCGCGC
GCCAACGGCG TCCAGGCCAT CGCCGCGAGG CTTTTGGGGA TCTCCGCCCC CGCGCTCAAC
AAGCGCCTCA AGCTCAAGCG GAAGTAG
|
|---|
| Protein sequence | MKSTPYPSFS ILLVDDEPAW LKSFSLTLKS RAGINNVLIC QDSREAMGLL DRGGVGLVLL
DLTMPHISGE TLLQQIAESH PEIMTIIVSG MNQLDTAVRC MKLGAFDYIV KTDEEDRLVG
GAMRAIRMLE LHQEFRAMSD RMISRELKHP EAFADIVTSD RGMHDLFNYV EAVSPSHQPL
LITGESGVGK ELIARAVHAL SGCQGPLVAV NVAGLDDTVF ADTLFGHVRG AYTGADQARP
GMIEQAGNGT LFLDEIGDLS IASQVKLLRL LQEGEYFQLG SDRPKRMNAR IVVATHRDLA
AKEAAGTFRR DLYYRLCTHR IQIPPLRERT SDIPLLLDYF LEQAAQSLGK KKPTPPKELA
QILATYSFPG NVRELRGMVY NAVSLHKERI LSMDSFLKAI GRSRVEQPLP ALHENPFQSF
ERLPTFAEAA ELLVEEAVSR ANGVQAIAAR LLGISAPALN KRLKLKRK
|
|---|
| |