Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0995 |
Symbol | rpsA |
ID | 8136316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1175332 |
End bp | 1177086 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644868609 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_003020818 |
Protein GI | 253699629 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 104 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGACG AAAAAAGGAC GTTCAAGAAA AAAGATATGC CTATCAGGCG GTTACACGAT AATGACGAGG AGCTGGATCA GGCCGAGATG GGTGGCGAGT TTGCCGACCT TTTCCAGGAC AGTCTGAGGC AGCCGCAGAG CGGCGAGGTA GTCAAGGCCG TCGTGGTCCA GATCGAGCAG GACGTTGTGC TCGTGGACGT CGGTTACAAG TCCGAAGGCG CTATCCGCAT CGGCGAGTTC ATCGACGAAA GCGGCGAACT CAACGTCAAG GTCGGTGACG AAGTGAACGT TTACTTCGAG CGCGGCGAGA ACATCCGCGG CCACATGGTC CTCTCGAAGA AGAAAGCCGA TTCCCAGGTT GCCTGGGAAA CCATCGCCGC AGCCGGCGAG GGTGGCGTCA TCGAAGGCAA GATCACCGGC AAGGTGAAGG GCGGCATGAC CGTCGACGTC GGCGTCGAGG CATTCCTTCC CGCGTCGCAG GTTGACCTTC GTCCCGGCGG CAACATGGAT CGCTTCGTCG GCCAGACCTA CCAGTTCAGG ATCCTGAAGC TGAACAGGAA GCGCGGCAAC CTCGTTCTTT CCCGTCGCGT GCTGCTCGAG GAAGAGCGCG AGAAGGCAAG GACCGAGACC CTGGCGACCC TGAAGGAAGG GGACATCGTC AACGGCGTGG TCAAGAACAT CGCCGAGTAC GGCGCGTTCG TCGACCTGGG CGGCGTGGAC GGCCTGCTGC ACGTAACCGA CATGTCCTGG GGCCGCCTCG GCCACCCCTC CGAGATGGTC AAAGTGGGCG ACACCCTGAA CGTGATGGTC CTTAAGTACG ACCGCGAGAA AGGGAAGATC TCCCTCGGCC TCAAGCAGAC CGTGCCCGAT CCCTGGCTCA ACGTCGGCGA TCGCTACAGG GAAGGCGAGA GGGTGAGCGG CAAAGTCGTG AGCCTGACCG ACTACGGCGC ATTCATCTCC CTGGAAGACG GCATCGAAGG TCTGGTGCAC GTTTCCGAGA TGTCCTGGAC CAGGAGGGTG CGTCACCCGT CCGAAATCCT CAAGGTCGGA GAGGAAGTCG AAGCAGTCAT CCTGGGCGTC GATCCGGGCA ACCGCAGGAT CTCCCTGGGG CTCAAGCAGA CCGAGATCAA CCCCTGGACC GTGATCGGGG AGCGTTACCC GGTAGGTACC AAGATCGAAG GTCAGATCAA GAACATCACC GACTTCGGCG TCTTCATCGG CATCGAGGAC GGCATCGACG GCCTGGTGCA TGTCTCCGAC ATCTCCTGGA CCCGCCGCGT GAAGCACCCG GGCGAGATGT TCACCAAAGG GCAGACCGTG CAGGCAGTCG TTCTCAACAT CGACGTCGAG AACGAGCGTC TCTCCCTGGG CATCAAGCAG CTGGCGGCCG ATCCGTGGGA AGAGATCCCC AGGAAGTACC GTCCGGGCTC CAAGGTCAAA GGGCGCGTCA CCTCCGTGAC CGACTTCGGC ATCTTCGTCG AGATCGAAGA AGGGATCGAG GGACTGATCC ACGTCTCCGA GATCTCCTAC GAGAAAGTCG CCTCCCCGAA AGACTTCGCC AACGTGGGCG ATGAGCTTGA GGCGGTAGTG CTGAACGTGG ACATGGTCGA GAAGAAGATC GCCCTCTCCA TCAAGGCGCT GCAGACCGCC ATGGAGAAGG CAGAGATGGC CTCCTACATG GGTAGCCAGG GTGAGGCCAC CTCCAGCTTC GGCGACCTGC TGAAAGAGAA GCTGAAGAAG AGCACCGAGG AATAG
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Protein sequence | MGDEKRTFKK KDMPIRRLHD NDEELDQAEM GGEFADLFQD SLRQPQSGEV VKAVVVQIEQ DVVLVDVGYK SEGAIRIGEF IDESGELNVK VGDEVNVYFE RGENIRGHMV LSKKKADSQV AWETIAAAGE GGVIEGKITG KVKGGMTVDV GVEAFLPASQ VDLRPGGNMD RFVGQTYQFR ILKLNRKRGN LVLSRRVLLE EEREKARTET LATLKEGDIV NGVVKNIAEY GAFVDLGGVD GLLHVTDMSW GRLGHPSEMV KVGDTLNVMV LKYDREKGKI SLGLKQTVPD PWLNVGDRYR EGERVSGKVV SLTDYGAFIS LEDGIEGLVH VSEMSWTRRV RHPSEILKVG EEVEAVILGV DPGNRRISLG LKQTEINPWT VIGERYPVGT KIEGQIKNIT DFGVFIGIED GIDGLVHVSD ISWTRRVKHP GEMFTKGQTV QAVVLNIDVE NERLSLGIKQ LAADPWEEIP RKYRPGSKVK GRVTSVTDFG IFVEIEEGIE GLIHVSEISY EKVASPKDFA NVGDELEAVV LNVDMVEKKI ALSIKALQTA MEKAEMASYM GSQGEATSSF GDLLKEKLKK STEE
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