Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0992 |
Symbol | |
ID | 8136313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1172422 |
End bp | 1173711 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644868606 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003020815 |
Protein GI | 253699626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACT ATACCGTTCA ACCCGCCAAG TCGGTGCGCG GCGAAATCAG CGTCCCCGGC GACAAGTCCA TATCGCACCG CTCCATCATG TTCGGCTCCA TCTCCTCCGG CGTAACCAAG GTGACCGGCT TCTTGCGCGG CGAGGACGCC CTGGCCACCC TCCAAGCCTT CCGCGCCATG GGGGTGCAGA TCGATGACGA CGGCGAGACG GTCACCATCC AGGGGAGAGG GCTCCACGGC CTGAGCGAGC CTACCGACGT GCTCGACTGC GGCAACTCCG GGACCTCGAT GCGCCTTTTG ACCGGGCTTC TCGCCGGGCA GAACTTCTTC TCGGTCCTCT CCGGGGACAA GTACCTGCGC GCCCGTCCCA TGAAGCGCGT GGTCGGGCCT TTGGCCCTGA TGGGCGCCCG CATCTCGGGG CGCGCCGGCG GCGAAAAGGC CCCCCTCGCC ATCCAGGGCT CGAAACTGAT AGGGATCGAA TACGACTCCC CCGTTTCCAG CGCACAGGTC AAGTCGGCCA TCATGCTGGC GGGGCTTTAC GCAGGCGGGG AGACGGTGGT GCGCGAGCCG CACCTCTCCC GCGACCACTC GGAGCGGATG CTGCGCGCTT TCGGCGCCCA CGTCGAGACC TTCCCGGGGG GCGTCAAGGT GCGCGGCGGG GCGGAACTAA CCGGACGCGA CATCGTGGTG CCGGGTGACA TCTCCTCGGC CGCCTTCTTC CTGGTCGCGG CCCTCATCGT CCCGGGCTCG GATCTCCTCA TCCGCGGCGT CGGCGTCAAC CCGACCCGCA CCGGCATCAT CGATGTGCTG AAGGGTATGG GGGGCGACCT GGAACTTACC AACCAGCGCG ACGAATCGGG AGAGCCGGTC GCCGACATCA GGGTGCGGCA CTCGAAGCTG ACCGCCATGG AGATATGCGG AGAAGTGGTG CCCCGCGCCA TCGACGAGTT TCCCGCCATC TGCGTCGCCG CCTCGCTGGC GCAAGGGACC ACGGTCGTGC GTGACGCCGC GGAGCTCCGC GTCAAGGAGA CCGACCGCAT CTCCGCCATG GCCGATAACC TGAGGCGCGC AGGCGTCAAC ATCGTCGAGA CTCCGGACGG CATGCAGATC ACCGGCGTCG CCTCTTTGAA AGGGTGCGCC GCCGACAGTT TCGGCGACCA CCGGATCGCC ATGTCCATGA TGGTCGCCGG TCTCGTAGCC CAAGGCGAAA CCAGCGTCTC GGACGTCGAG TGCATCGCCA CCTCGTTCCC CGGCTTCGTC AACCTCCTCG ACGGGGTGGT GCAGCGGTGA
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Protein sequence | MENYTVQPAK SVRGEISVPG DKSISHRSIM FGSISSGVTK VTGFLRGEDA LATLQAFRAM GVQIDDDGET VTIQGRGLHG LSEPTDVLDC GNSGTSMRLL TGLLAGQNFF SVLSGDKYLR ARPMKRVVGP LALMGARISG RAGGEKAPLA IQGSKLIGIE YDSPVSSAQV KSAIMLAGLY AGGETVVREP HLSRDHSERM LRAFGAHVET FPGGVKVRGG AELTGRDIVV PGDISSAAFF LVAALIVPGS DLLIRGVGVN PTRTGIIDVL KGMGGDLELT NQRDESGEPV ADIRVRHSKL TAMEICGEVV PRAIDEFPAI CVAASLAQGT TVVRDAAELR VKETDRISAM ADNLRRAGVN IVETPDGMQI TGVASLKGCA ADSFGDHRIA MSMMVAGLVA QGETSVSDVE CIATSFPGFV NLLDGVVQR
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