| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0981 |
|---|
| Symbol | mnmA |
|---|
| ID | 8136302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1159445 |
|---|
| End bp | 1160512 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644868595 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_003020804 |
|---|
| Protein GI | 253699615 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 0.561547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGA ATTATAAAGG CAGGAAAGTA GCCGTCGCCA TGAGCGGCGG TGTCGATTCG
TCCACGGTCG CCGCCCTCCT CAAAGAGCAG GGCGCGGAGG TGATCGGGAT CAATATGAAG
CTCTTCGCGC GCGACGGCGA GGACCCGCAG GCCAAGGGCG ACGCGCAGAT CGTCGCCGAG
TACCTGGGGA TCGAATTCCA CCTGGTGCAT CTGGAGGAAG AATTCTCGCG CCTCATCATG
GAGGACTTCC GCGCGCAGTA CCTTGGGGGC GAGACCCCCA ACCCGTGTGT CCGCTGCAAC
CGCTACGTCA AGTTCGGGCT CCTTTTGGAC AAGGCGCTGG AACTGGGGGC GGAGTACCTG
GCCACCGGCC ATTACGTGAG GACCAGCAGG GACGATGGGG GTAGCTATCA CCTGCTGAAA
GCGGCCTTTC TCGCCAAGGA CCAGTCCTAC TTCCTCTACA CGCTGACCCA AAAGCAGCTC
TCACATGTGG TCTTCCCGTT GGGGGATATG CCGAGCAAGG ACGAGGTGCG CAGGCTGGCG
GAAAAGTTCG GGCTCCCGGT GGCGCAAAAG AGCGACAGCC AGGAGATCTG CTTCGTTCCC
GGCGACGATT ACGTAGCCTT CCTGGAAAAA GGGGGGCGAG TCGCGGGTAA AAGCGGCGAC
ATCGTCCATG TCGACGGCGC CGTGTTGGGA CGGCACAGCG GCACCCACCG GTACACCATC
GGCCAGAGGC GCGGGCTCGG CGTCGCCTGG AAGGAGCCTC TTTACGTGGT GTCGATCGAT
GCGCTGGAGG GGAGGGTGGT GGTCGGCGAG GTCGGGCGGC TTTTCGCCGC GGGGCTCGTG
GCCTGCGATC TGAACTGGGT GGTGCCGGTA GAGGGGGAGA CGTTCGAGAC AACCTGCAAG
ATCCGCTATC GGCAGCAACC CATAGCGTGC CGGGTCAAGC TTTTGGGCGA GGGGCTGGGC
GAGGTTTTCT TCGCCGAGCC GCAGAAGTCG GTGACGCCGG GGCAGTCCGT CGTCTTCTAC
CGCGACGACG AGCTTCTGGG CGGCGGCCGC ATCGTCGGGA AGATATAG
|
|---|
| Protein sequence | MSANYKGRKV AVAMSGGVDS STVAALLKEQ GAEVIGINMK LFARDGEDPQ AKGDAQIVAE
YLGIEFHLVH LEEEFSRLIM EDFRAQYLGG ETPNPCVRCN RYVKFGLLLD KALELGAEYL
ATGHYVRTSR DDGGSYHLLK AAFLAKDQSY FLYTLTQKQL SHVVFPLGDM PSKDEVRRLA
EKFGLPVAQK SDSQEICFVP GDDYVAFLEK GGRVAGKSGD IVHVDGAVLG RHSGTHRYTI
GQRRGLGVAW KEPLYVVSID ALEGRVVVGE VGRLFAAGLV ACDLNWVVPV EGETFETTCK
IRYRQQPIAC RVKLLGEGLG EVFFAEPQKS VTPGQSVVFY RDDELLGGGR IVGKI
|
|---|
| |