Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0971 |
Symbol | |
ID | 8136292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1148229 |
End bp | 1149230 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644868585 |
Product | secretion protein HlyD family protein |
Protein accession | YP_003020794 |
Protein GI | 253699605 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 0.70003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA AGGCGATCAT TGCGGCATTG CTGGTGGCGG TTGTGGTGGC GGTTGTTTTC TACCTTCGCC ACGACCGGGA CGGGGAGAGT TCCACGGCGC TGCGCATCTC TGGGAACATC GAGGTCACCG AGGTGCAACT GAGTTTCAAG ACTTCGGGCA GGGTCCTGGA GCGGCTGGTC GACGAGGGGA TTGAGGTCGC CCGCGGCCAA GTCGTTGCGC GCCTGGAAGA GCGCGAACTC GCCGACGCGC TTAAGCTCGC GCAGGCGGAT GAGGCTGCCG CCGCCGCGTC GCTTGCGGAA CTGGAAGCCG GCAACCGCAG GGAAGAGGTG GCCCAGGGGG CGGCGCTTTT GGCTCGCGCC GAGGCGCAAG CCGCGCGGGT AACGGCCGAT TACGACAGGA GCAAGGCCCT CTTCGCCAAG GAGGTCATCC CCCGGCAGCA GTTCGACGCA GCCAAGGCGG CCTACGAGGA GGCCAGGGCC TCGGTGCGCG AGCGCAGGGA AGCGCTTAAC CTTTTGCGCA AGGGGGCGCG CCCCGAGCGT CTGCAAGCCG CCCGGGCGGC ACATGAAGGC GCGCTGGCGC GGGTCTCCAC GGCAAAGGAG CGGCTGGGGT ACGCCACCTT GACGGCGCCC ATATCCGGGG TGGTGCTCAA CAAATCGATC GAGCCGGGCG AACAGGTGGC GGCGGGGACC CCCGTGGTCA CGCTGGGCGA CCTTAAGGAT TGCTGGCTCA AGGGATACAT TCCCGAGACG GAACTGGCGC GGGTAAAGCT TGGGCAGAGG GCGCGGGTAA CGGCCGACGG GCTTCCCGGC AAGGCCTTCG AGGGGAGGGT GAGTTTCATC TCCAGCCAGG CGGAGTTCAC CCCCAAGAGC GTGCAGACCG AGAAGGAGCG GGTGAAACTC GTGTACCGTG TGAAGATCTC TTTGGCCAAC CCGGGGATGG AGCTGAAGCC GGGGATGCCG GCCGATGCCG TGATAGATCT GGGTGCGGAG CCGGCGCGCT GA
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Protein sequence | MKKKAIIAAL LVAVVVAVVF YLRHDRDGES STALRISGNI EVTEVQLSFK TSGRVLERLV DEGIEVARGQ VVARLEEREL ADALKLAQAD EAAAAASLAE LEAGNRREEV AQGAALLARA EAQAARVTAD YDRSKALFAK EVIPRQQFDA AKAAYEEARA SVRERREALN LLRKGARPER LQAARAAHEG ALARVSTAKE RLGYATLTAP ISGVVLNKSI EPGEQVAAGT PVVTLGDLKD CWLKGYIPET ELARVKLGQR ARVTADGLPG KAFEGRVSFI SSQAEFTPKS VQTEKERVKL VYRVKISLAN PGMELKPGMP ADAVIDLGAE PAR
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